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GTF2H2 general transcription factor IIH subunit 2 [ Neopelma chrysocephalum (saffron-crested tyrant-manakin) ]

Gene ID: 113981944, updated on 3-Aug-2024

Summary

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Gene symbol
GTF2H2
Gene description
general transcription factor IIH subunit 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Neopelma chrysocephalum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Neopelma
Orthologs
human all
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Genomic context

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See GTF2H2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current ASM398488v2 (GCF_003984885.1) Unplaced Scaffold NW_020925465.1 (710152..733446, complement)

NW_020925465.1Genomic Context describing neighboring genes Neighboring gene small EDRK-rich factor 1-like Neighboring gene survival of motor neuron protein-like Neighboring gene MARVEL domain containing 2 Neighboring gene uncharacterized LOC113960637 Neighboring gene E3 ubiquitin-protein ligase Topors-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020925465 Unplaced Scaffold Reference ASM398488v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIIH core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription factor TFIIH holo complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
general transcription factor IIH subunit 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neopelma chrysocephalum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM398488v2

Genomic

  1. NW_020925465.1 Reference ASM398488v2

    Range
    710152..733446 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027709668.1 → XP_027565469.1  general transcription factor IIH subunit 2 isoform X2

    Conserved Domains (2) summary
    COG5151
    Location:11 → 385
    SSL1; RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit SSL1 [Transcription / DNA replication, recombination, and repair]
    cd01453
    Location:56 → 236
    vWA_transcription_factor_IIH_type; Transcription factors IIH type: TFIIH is a multiprotein complex that is one of the five general transcription factors that binds RNA polymerase II holoenzyme. Orthologues of these genes are found in all completed eukaryotic genomes and all these proteins ...

  2. XM_027709667.1 → XP_027565468.1  general transcription factor IIH subunit 2 isoform X1

Nucleotide Protein
Heading Accession and Version

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