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MIR169H microRNA MIR169h [ Citrus sinensis (sweet orange) ]

Gene ID: 114483811, updated on 12-May-2024

Summary

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Gene symbol
MIR169H
Gene description
microRNA MIR169h
See related
miRBase:MI0039643
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Citrus sinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
Also known as
csi-MIR169h
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

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See MIR169H in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Annotation release Status Assembly Chr Location
103 current DVS_A1.0 (GCF_022201045.2) 2 NC_068557.1 (8783262..8783423, complement)

Chromosome 2 - NC_068557.1Genomic Context describing neighboring genes Neighboring gene microRNA MIR169i Neighboring gene small nucleolar RNA R71 Neighboring gene uncharacterized LOC107175623 Neighboring gene microRNA MIR169c

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_068557.1 Chromosome 2 Reference DVS_A1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_161509.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    JAHMIS010000002

RefSeqs of Annotated Genomes: Citrus sinensis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DVS_A1.0 Primary Assembly

Genomic

  1. NC_068557.1 Reference DVS_A1.0 Primary Assembly

    Range
    8783262..8783423 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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