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slc25a11 solute carrier family 25 member 11 [ Perca flavescens (yellow perch) ]

Gene ID: 114545288, updated on 18-Sep-2024

Summary

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Gene symbol
slc25a11
Gene description
solute carrier family 25 member 11
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
Orthologs
human zebrafish all
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Genomic context

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See slc25a11 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
9
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 19 NC_041349.1 (1784890..1795224)

Chromosome 19 - NC_041349.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 721-like Neighboring gene uncharacterized LOC114545297 Neighboring gene motile sperm domain-containing protein 1-like Neighboring gene profilin-2-like Neighboring gene enolase 3, (beta, muscle)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041349.1 Chromosome 19 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables malate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxaloacetate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables succinate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sulfate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables thiosulfate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in malate transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oxaloacetate transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphate ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in succinate transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in thiosulfate transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: mitochondrial 2-oxoglutarate/malate carrier protein
Names
mitochondrial 2-oxoglutarate/malate carrier protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041349.1 Reference PFLA_1.0 Primary Assembly

    Range
    1784890..1795224
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028563583.1 → XP_028419384.1  LOW QUALITY PROTEIN: mitochondrial 2-oxoglutarate/malate carrier protein

    UniProtKB/TrEMBL
    F1C704
    Conserved Domains (1) summary
    pfam00153
    Location:218 → 309
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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