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LOC114574110 coxsackievirus and adenovirus receptor-like [ Perca flavescens (yellow perch) ]

Gene ID: 114574110, updated on 21-Dec-2023

Summary

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Gene symbol
LOC114574110
Gene description
coxsackievirus and adenovirus receptor-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Perca flavescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Percinae; Perca
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Genomic context

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See LOC114574110 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
3
Annotation release Status Assembly Chr Location
100 current PFLA_1.0 (GCF_004354835.1) 19 NC_041349.1 (4485870..4487251, complement)

Chromosome 19 - NC_041349.1Genomic Context describing neighboring genes Neighboring gene low affinity immunoglobulin gamma Fc region receptor II-like Neighboring gene myelin protein P0-like Neighboring gene carcinoembryonic antigen-related cell adhesion molecule 20-like Neighboring gene butyrophilin subfamily 2 member A1-like Neighboring gene uncharacterized LOC114574096 Neighboring gene low affinity immunoglobulin gamma Fc region receptor II-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041349.1 Chromosome 19 Reference PFLA_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in T cell costimulation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell surface receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to lipopolysaccharide IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of T cell proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of T cell proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coxsackievirus and adenovirus receptor-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Perca flavescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PFLA_1.0 Primary Assembly

Genomic

  1. NC_041349.1 Reference PFLA_1.0 Primary Assembly

    Range
    4485870..4487251 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028606436.1 → XP_028462237.1  coxsackievirus and adenovirus receptor-like

    Conserved Domains (1) summary
    cl11960
    Location:35 → 117
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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