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LOC114576747 tetratricopeptide repeat protein 28 [ Exaiptasia diaphana ]

Gene ID: 114576747, updated on 23-Nov-2023

Summary

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Gene symbol
LOC114576747
Gene description
tetratricopeptide repeat protein 28
Locus tag
AC249_AIPGENE22907
See related
EnsemblRapid:LOC114576747
Gene type
protein coding
RefSeq status
MODEL
Organism
Exaiptasia diaphana
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Aiptasiidae; Exaiptasia
Also known as
Ttc28
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Genomic context

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See LOC114576747 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_11 current Aiptasia genome 1.1 (GCF_001417965.1) Unplaced Scaffold NW_018384441.1 (139244..142056, complement)

NW_018384441.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110254944 Neighboring gene A disintegrin and metalloproteinase with thrombospondin motifs 18 Neighboring gene tetratricopeptide repeat protein 28 Neighboring gene tetratricopeptide repeat protein 28 Neighboring gene isocitrate dehydrogenase [NADP] cytoplasmic

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018384441 Unplaced Scaffold Reference Aiptasia genome 1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tetratricopeptide repeat protein 28

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001417965.1-RS_2023_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aiptasia genome 1.1

Genomic

  1. NW_018384441.1 Reference Aiptasia genome 1.1

    Range
    139244..142056 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028663969.1 → XP_028519770.1  tetratricopeptide repeat protein 28

    UniProtKB/TrEMBL
    A0A913YW77
    Related
    XP_028519770.1, XM_028663969.1
    Conserved Domains (4) summary
    COG0457
    Location:2 → 197
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:47 → 75
    TPR; TPR repeat [structural motif]
    pfam12770
    Location:471 → 680
    CHAT; CHAT domain
    pfam13424
    Location:167 → 249
    TPR_12; Tetratricopeptide repeat
Nucleotide Protein
Heading Accession and Version

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