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SNRNP70 small nuclear ribonucleoprotein U1 subunit 70 [ Podarcis muralis (Common wall lizard) ]

Gene ID: 114608099, updated on 15-Mar-2024

Summary

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Gene symbol
SNRNP70
Gene description
small nuclear ribonucleoprotein U1 subunit 70
See related
Ensembl:ENSPMRG00000013280
Gene type
protein coding
RefSeq status
MODEL
Organism
Podarcis muralis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Podarcis
Orthologs
human mouse all
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Genomic context

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See SNRNP70 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
10
Annotation release Status Assembly Chr Location
100 current PodMur_1.0 (GCF_004329235.1) 13 NC_041324.1 (17845560..17860801, complement)

Chromosome 13 - NC_041324.1Genomic Context describing neighboring genes Neighboring gene PTPRF interacting protein alpha 3 Neighboring gene lin-7 homolog B, crumbs cell polarity complex component Neighboring gene potassium voltage-gated channel subfamily A member 7 Neighboring gene brain-derived neurotrophic factor-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041324.1 Chromosome 13 Reference PodMur_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables U1 snRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U1 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U2-type prespliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of precatalytic spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
U1 small nuclear ribonucleoprotein 70 kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Podarcis muralis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PodMur_1.0 Primary Assembly

Genomic

  1. NC_041324.1 Reference PodMur_1.0 Primary Assembly

    Range
    17845560..17860801 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028752032.1 → XP_028607865.1  U1 small nuclear ribonucleoprotein 70 kDa isoform X2

    UniProtKB/TrEMBL
    A0A670J7D3
    Related
    ENSPMRP00000020383.1, ENSPMRT00000021655.1
    Conserved Domains (2) summary
    cd12236
    Location:102 → 187
    RRM_snRNP70; RNA recognition motif in U1 small nuclear ribonucleoprotein 70 kDa (U1-70K) and similar proteins
    pfam12220
    Location:3 → 93
    U1snRNP70_N; U1 small nuclear ribonucleoprotein of 70kDa MW N terminal

  2. XM_028752031.1 → XP_028607864.1  U1 small nuclear ribonucleoprotein 70 kDa isoform X1

    UniProtKB/TrEMBL
    A0A670J7D3
    Conserved Domains (2) summary
    cd12236
    Location:102 → 187
    RRM_snRNP70; RNA recognition motif in U1 small nuclear ribonucleoprotein 70 kDa (U1-70K) and similar proteins
    pfam12220
    Location:3 → 93
    U1snRNP70_N; U1 small nuclear ribonucleoprotein of 70kDa MW N terminal
Nucleotide Protein
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