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LOC115052487 probable G-protein coupled receptor 21 [ Echeneis naucrates (live sharksucker) ]

Gene ID: 115052487, updated on 17-Mar-2024

Summary

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Gene symbol
LOC115052487
Gene description
probable G-protein coupled receptor 21
Gene type
protein coding
RefSeq status
MODEL
Organism
Echeneis naucrates
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Echeneidae; Echeneis
Orthologs
zebrafish all
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Genomic context

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See LOC115052487 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
1
Annotation release Status Assembly Chr Location
100 current fEcheNa1.1 (GCF_900963305.1) 12 NC_042522.1 (4338896..4341592)

Chromosome 12 - NC_042522.1Genomic Context describing neighboring genes Neighboring gene NIM1 serine/threonine protein kinase Neighboring gene ring finger and CCCH-type domains 2 Neighboring gene RAB GTPase activating protein 1 Neighboring gene spermatid perinuclear RNA binding protein Neighboring gene SH2 domain containing 3Ca

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042522.1 Chromosome 12 Reference fEcheNa1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable G-protein coupled receptor 21

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Echeneis naucrates Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEcheNa1.1 Primary Assembly

Genomic

  1. NC_042522.1 Reference fEcheNa1.1 Primary Assembly

    Range
    4338896..4341592
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029516632.1 → XP_029372492.1  probable G-protein coupled receptor 21 isoform X1

  2. XM_029516633.1 → XP_029372493.1  probable G-protein coupled receptor 21 isoform X2

    UniProtKB/TrEMBL
    A0A665WS06
    Conserved Domains (1) summary
    cd00637
    Location:53 → 321
    7tm_classA_rhodopsin-like; rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily
Nucleotide Protein
Heading Accession and Version

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