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nrxn1 neurexin 1 [ Echeneis naucrates (live sharksucker) ]

Gene ID: 115055880, updated on 18-Aug-2023

Summary

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Gene symbol
nrxn1
Gene description
neurexin 1
See related
Ensembl:ENSENLG00000020187
Gene type
protein coding
RefSeq status
MODEL
Organism
Echeneis naucrates
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Echeneidae; Echeneis
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Genomic context

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See nrxn1 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
24
Annotation release Status Assembly Chr Location
100 current fEcheNa1.1 (GCF_900963305.1) 15 NC_042525.1 (6126718..6357220, complement)

Chromosome 15 - NC_042525.1Genomic Context describing neighboring genes Neighboring gene general transcription factor IIA, 1-like Neighboring gene luteinizing hormone/choriogonadotropin receptor Neighboring gene endoplasmic reticulum lectin 1 Neighboring gene G protein-coupled receptor 75

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042525.1 Chromosome 15 Reference fEcheNa1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
neurexin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Echeneis naucrates Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEcheNa1.1 Primary Assembly

Genomic

  1. NC_042525.1 Reference fEcheNa1.1 Primary Assembly

    Range
    6126718..6357220 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029521935.1 → XP_029377795.1  neurexin-1 isoform X8

    UniProtKB/TrEMBL
    A0A665WVP2
    Related
    ENSENLP00000048054.1, ENSENLT00000049201.1

  2. XM_029521936.1 → XP_029377796.1  neurexin-1 isoform X9

    UniProtKB/TrEMBL
    A0A665WWQ4
    Related
    ENSENLP00000048057.1, ENSENLT00000049205.1

  3. XM_029521932.1 → XP_029377792.1  neurexin-1 isoform X6

  4. XM_029521931.1 → XP_029377791.1  neurexin-1 isoform X5

    Conserved Domains (3) summary
    smart00294
    Location:379 → 397
    4.1m; putative band 4.1 homologues' binding motif
    cd00110
    Location:86 → 236
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam01034
    Location:359 → 398
    Syndecan; Syndecan domain

  5. XM_029521930.1 → XP_029377790.1  neurexin-1 isoform X4

  6. XM_029521929.1 → XP_029377789.1  neurexin-1 isoform X3

  7. XM_029521928.1 → XP_029377788.1  neurexin-1 isoform X2

  8. XM_029521927.1 → XP_029377787.1  neurexin-1 isoform X1

  9. XM_029521934.1 → XP_029377794.1  neurexin-1 isoform X7

Nucleotide Protein
Heading Accession and Version

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