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gbf1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 [ Echeneis naucrates (live sharksucker) ]

Gene ID: 115055888, updated on 17-Mar-2024

Summary

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Gene symbol
gbf1
Gene description
golgi brefeldin A resistant guanine nucleotide exchange factor 1
See related
Ensembl:ENSENLG00000004255
Gene type
protein coding
RefSeq status
MODEL
Organism
Echeneis naucrates
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Echeneidae; Echeneis
Orthologs
human zebrafish all
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Genomic context

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See gbf1 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
41
Annotation release Status Assembly Chr Location
100 current fEcheNa1.1 (GCF_900963305.1) 15 NC_042525.1 (20206408..20307466)

Chromosome 15 - NC_042525.1Genomic Context describing neighboring genes Neighboring gene inactive pancreatic lipase-related protein 1-like Neighboring gene paired-like homeodomain 3 Neighboring gene core histone macro-H2A.2 Neighboring gene collagen, type XIII, alpha 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042525.1 Chromosome 15 Reference fEcheNa1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of ARF protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Echeneis naucrates Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fEcheNa1.1 Primary Assembly

Genomic

  1. NC_042525.1 Reference fEcheNa1.1 Primary Assembly

    Range
    20206408..20307466
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029521955.1 → XP_029377815.1  Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1

    UniProtKB/TrEMBL
    A0A665TQ03

  2. XM_029521954.1 → XP_029377814.1  Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1

    UniProtKB/TrEMBL
    A0A665TQ03
    Related
    ENSENLP00000008893.1, ENSENLT00000009325.1

  3. XM_029521956.1 → XP_029377816.1  Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X2

    UniProtKB/TrEMBL
    A0A665TN86, A0A665TQ03
    Related
    ENSENLP00000008853.1, ENSENLT00000009282.1
    Conserved Domains (3) summary
    COG5307
    Location:410 → 1152
    COG5307; Guanine-nucleotide exchange factor, contains Sec7 domain [General function prediction only]
    pfam01369
    Location:701 → 886
    Sec7; Sec7 domain
    pfam03154
    Location:1731 → 1869
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
Heading Accession and Version

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