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LOC115100796 potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1-like [ Rhinatrema bivittatum (two-lined caecilian) ]

Gene ID: 115100796, updated on 17-Nov-2020

Summary

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Gene symbol
LOC115100796
Gene description
potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinatrema bivittatum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Rhinatrematidae; Rhinatrema
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Genomic context

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See LOC115100796 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Annotation release Status Assembly Chr Location
100 current aRhiBiv1.1 (GCF_901001135.1) 1 NC_042615.1 (730948036..731263081, complement)

Chromosome 1 - NC_042615.1Genomic Context describing neighboring genes Neighboring gene fibroblast growth factor 10 Neighboring gene mitochondrial ribosomal protein S30 Neighboring gene transfer RNA alanine (anticodon CGC) Neighboring gene transfer RNA alanine (anticodon UGC)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042615.1 Chromosome 1 Reference aRhiBiv1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhinatrema bivittatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRhiBiv1.1 Primary Assembly

Genomic

  1. NC_042615.1 Reference aRhiBiv1.1 Primary Assembly

    Range
    730948036..731263081 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029619687.1 → XP_029475547.1  potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1-like

    Conserved Domains (2) summary
    PRK10263
    Location:282 → 505
    PRK10263; DNA translocase FtsK; Provisional
    cd00038
    Location:84 → 192
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
Nucleotide Protein
Heading Accession and Version

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