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LOC115100881 sorting nexin-2-like [ Rhinatrema bivittatum (two-lined caecilian) ]

Gene ID: 115100881, updated on 21-Dec-2023

Summary

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Gene symbol
LOC115100881
Gene description
sorting nexin-2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinatrema bivittatum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Rhinatrematidae; Rhinatrema
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Genomic context

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See LOC115100881 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Annotation release Status Assembly Chr Location
100 current aRhiBiv1.1 (GCF_901001135.1) 1 NC_042615.1 (603021958..603072043, complement)

Chromosome 1 - NC_042615.1Genomic Context describing neighboring genes Neighboring gene peptidylprolyl isomerase C Neighboring gene sorting nexin 24 Neighboring gene sorting nexin-2 Neighboring gene uncharacterized LOC115100901

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042615.1 Chromosome 1 Reference aRhiBiv1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in early endosome to Golgi transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sorting nexin-2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhinatrema bivittatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRhiBiv1.1 Primary Assembly

Genomic

  1. NC_042615.1 Reference aRhiBiv1.1 Primary Assembly

    Range
    603021958..603072043 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029619909.1 → XP_029475769.1  sorting nexin-2-like

    Conserved Domains (1) summary
    cl12013
    Location:1 → 167
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
Nucleotide Protein
Heading Accession and Version

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