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LOC115100883 piggyBac transposable element-derived protein 3-like [ Rhinatrema bivittatum (two-lined caecilian) ]

Gene ID: 115100883, updated on 21-Dec-2023

Summary

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Gene symbol
LOC115100883
Gene description
piggyBac transposable element-derived protein 3-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinatrema bivittatum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Rhinatrematidae; Rhinatrema
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Genomic context

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See LOC115100883 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Annotation release Status Assembly Chr Location
100 current aRhiBiv1.1 (GCF_901001135.1) 1 NC_042615.1 (735893493..735894845, complement)

Chromosome 1 - NC_042615.1Genomic Context describing neighboring genes Neighboring gene integrin subunit alpha 1 Neighboring gene ISL LIM homeobox 1 Neighboring gene poly(ADP-ribose) polymerase family member 8 Neighboring gene embigin

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042615.1 Chromosome 1 Reference aRhiBiv1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
piggyBac transposable element-derived protein 3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhinatrema bivittatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRhiBiv1.1 Primary Assembly

Genomic

  1. NC_042615.1 Reference aRhiBiv1.1 Primary Assembly

    Range
    735893493..735894845 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029619924.1 → XP_029475784.1  piggyBac transposable element-derived protein 3-like

    Conserved Domains (1) summary
    pfam13843
    Location:26 → 382
    DDE_Tnp_1_7; Transposase IS4
Nucleotide Protein
Heading Accession and Version

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