U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRFBP1 serum response factor binding protein 1 [ Rhinatrema bivittatum (two-lined caecilian) ]

Gene ID: 115100960, updated on 17-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
SRFBP1
Gene description
serum response factor binding protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinatrema bivittatum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Rhinatrematidae; Rhinatrema
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SRFBP1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
100 current aRhiBiv1.1 (GCF_901001135.1) 1 NC_042615.1 (604579498..604752574, complement)

Chromosome 1 - NC_042615.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 474-like Neighboring gene uncharacterized LOC115100934 Neighboring gene lysyl oxidase Neighboring gene proline rich 16 Neighboring gene tigger transposable element-derived protein 1-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_042615.1 Chromosome 1 Reference aRhiBiv1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in maturation of SSU-rRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 90S preribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
serum response factor-binding protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Rhinatrema bivittatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRhiBiv1.1 Primary Assembly

Genomic

  1. NC_042615.1 Reference aRhiBiv1.1 Primary Assembly

    Range
    604579498..604752574 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029620087.1 → XP_029475947.1  serum response factor-binding protein 1

    Conserved Domains (3) summary
    PRK14949
    Location:145 → 274
    PRK14949; DNA polymerase III subunits gamma and tau; Provisional
    pfam06070
    Location:323 → 414
    Herpes_UL32; Herpesvirus large structural phosphoprotein UL32
    pfam09073
    Location:404 → 458
    BUD22
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.