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LOC115100985 acetyl-CoA carboxylase 2-like [ Rhinatrema bivittatum (two-lined caecilian) ]

Gene ID: 115100985, updated on 21-Dec-2023

Summary

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Gene symbol
LOC115100985
Gene description
acetyl-CoA carboxylase 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhinatrema bivittatum
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Rhinatrematidae; Rhinatrema
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Genomic context

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See LOC115100985 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
53
Annotation release Status Assembly Chr Location
100 current aRhiBiv1.1 (GCF_901001135.1) 11 NC_042625.1 (29533737..30515991)

Chromosome 11 - NC_042625.1Genomic Context describing neighboring genes Neighboring gene alkB homolog 2, alpha-ketoglutarate dependent dioxygenase Neighboring gene acetyl-CoA carboxylase 2-like Neighboring gene uracil DNA glycosylase Neighboring gene forkhead box N4 Neighboring gene myosin IH

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042625.1 Chromosome 11 Reference aRhiBiv1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables acetyl-CoA carboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: acetyl-CoA carboxylase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Rhinatrema bivittatum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aRhiBiv1.1 Primary Assembly

Genomic

  1. NC_042625.1 Reference aRhiBiv1.1 Primary Assembly

    Range
    29533737..30515991
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029620121.1 → XP_029475981.1  LOW QUALITY PROTEIN: acetyl-CoA carboxylase 2-like

    Conserved Domains (4) summary
    COG0439
    Location:40 → 544
    AccC; Biotin carboxylase [Lipid transport and metabolism]
    pfam00364
    Location:677 → 741
    Biotin_lipoyl; Biotin-requiring enzyme
    pfam01039
    Location:1582 → 2130
    Carboxyl_trans; Carboxyl transferase domain
    pfam08326
    Location:742 → 1490
    ACC_central; Acetyl-CoA carboxylase, central region
Nucleotide Protein
Heading Accession and Version

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