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esf1 ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae) [ Salmo trutta (river trout) ]

Gene ID: 115208547, updated on 17-Mar-2024

Summary

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Gene symbol
esf1
Gene description
ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)
See related
Ensembl:ENSSTUG00000034056
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
Orthologs
human zebrafish all
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Genomic context

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See esf1 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
14
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 14 NC_042970.1 (62087967..62100086, complement)

Chromosome 14 - NC_042970.1Genomic Context describing neighboring genes Neighboring gene ERO1-like protein beta Neighboring gene BTB/POZ domain-containing protein 3-like Neighboring gene uncharacterized LOC115208549 Neighboring gene kinesin-like protein KIF16B

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042970.1 Chromosome 14 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ESF1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042970.1 Reference fSalTru1.1 Primary Assembly

    Range
    62087967..62100086 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029776679.1 → XP_029632539.1  ESF1 homolog

    UniProtKB/TrEMBL
    A0A674C1P2
    Related
    ENSSTUP00000077258.1, ENSSTUT00000082291.1
    Conserved Domains (1) summary
    COG5638
    Location:240 → 725
    COG5638; Uncharacterized conserved protein [Function unknown]
Nucleotide Protein
Heading Accession and Version

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