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rbm4.1 RNA binding motif protein 4.1 [ Sphaeramia orbicularis (orbiculate cardinalfish) ]

Gene ID: 115438293, updated on 17-Mar-2024

Summary

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Gene symbol
rbm4.1
Gene description
RNA binding motif protein 4.1
See related
Ensembl:ENSSORG00005012877
Gene type
protein coding
RefSeq status
MODEL
Organism
Sphaeramia orbicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Kurtiformes; Apogonoidei; Apogonidae; Apogoninae; Sphaeramia
Orthologs
zebrafish all
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Genomic context

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See rbm4.1 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
3
Annotation release Status Assembly Chr Location
100 current fSphaOr1.1 (GCF_902148855.1) 18 NC_043974.1 (16102837..16106902)

Chromosome 18 - NC_043974.1Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase kinase kinase kinase 2 Neighboring gene RNA-binding protein 4.1-like Neighboring gene uncharacterized LOC115438940 Neighboring gene splicing factor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_043974.1 Chromosome 18 Reference fSphaOr1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA-binding protein 4.1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sphaeramia orbicularis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSphaOr1.1

Genomic

  1. NC_043974.1 Reference fSphaOr1.1

    Range
    16102837..16106902
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030161801.1 → XP_030017661.1  RNA-binding protein 4.1-like

    UniProtKB/TrEMBL
    A0A673ACG2
    Related
    ENSSORP00005026904.1, ENSSORT00005027687.1
    Conserved Domains (3) summary
    PTZ00368
    Location:143 → 180
    PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
    smart00343
    Location:159 → 174
    ZnF_C2HC; zinc finger
    cl17169
    Location:2 → 68
    RRM_SF; RNA recognition motif (RRM) superfamily

  2. XM_030161802.1 → XP_030017662.1  RNA-binding protein 4.1-like

    UniProtKB/TrEMBL
    A0A673ACG2
    Conserved Domains (3) summary
    PTZ00368
    Location:143 → 180
    PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional
    smart00343
    Location:159 → 174
    ZnF_C2HC; zinc finger
    cl17169
    Location:2 → 68
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
Heading Accession and Version

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