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cplx3b complexin 3b [ Sphaeramia orbicularis (orbiculate cardinalfish) ]

Gene ID: 115439565, updated on 12-Sep-2024

Summary

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Gene symbol
cplx3b
Gene description
complexin 3b
See related
Ensembl:ENSSORG00005007041
Gene type
protein coding
RefSeq status
MODEL
Organism
Sphaeramia orbicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Kurtiformes; Apogonoidei; Apogonidae; Apogoninae; Sphaeramia
Also known as
cplx3
Orthologs
human zebrafish all
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Genomic context

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See cplx3b in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Annotation release Status Assembly Chr Location
100 current fSphaOr1.1 (GCF_902148855.1) 3 NC_043959.1 (35260744..35267893)

Chromosome 3 - NC_043959.1Genomic Context describing neighboring genes Neighboring gene enhancer of mRNA decapping 3 Neighboring gene C-terminal Src kinase Neighboring gene growth arrest-specific protein 1-like Neighboring gene uncharacterized LOC115439007 Neighboring gene unc-51 like kinase 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_043959.1 Chromosome 3 Reference fSphaOr1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables syntaxin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neurotransmitter transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of neurotransmitter secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic vesicle exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SNARE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in terminal bouton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
complexin-3
Names
complexin 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sphaeramia orbicularis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSphaOr1.1

Genomic

  1. NC_043959.1 Reference fSphaOr1.1

    Range
    35260744..35267893
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030163435.1 → XP_030019295.1  complexin-3

    UniProtKB/TrEMBL
    A0A672ZA11
    Related
    ENSSORP00005013679.1, ENSSORT00005014092.1
    Conserved Domains (1) summary
    pfam05835
    Location:1 → 137
    Synaphin; Synaphin protein
Nucleotide Protein
Heading Accession and Version

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