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LOC115439703 ribosomal L1 domain-containing protein 1-like [ Sphaeramia orbicularis (orbiculate cardinalfish) ]

Gene ID: 115439703, updated on 23-Oct-2023

Summary

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Gene symbol
LOC115439703
Gene description
ribosomal L1 domain-containing protein 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Sphaeramia orbicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Kurtiformes; Apogonoidei; Apogonidae; Apogoninae; Sphaeramia
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Genomic context

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See LOC115439703 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
9
Annotation release Status Assembly Chr Location
100 current fSphaOr1.1 (GCF_902148855.1) 19 NC_043975.1 (39035415..39045811, complement)

Chromosome 19 - NC_043975.1Genomic Context describing neighboring genes Neighboring gene sorting nexin 29 Neighboring gene uncharacterized LOC115439705 Neighboring gene uncharacterized LOC115439704 Neighboring gene transmembrane protein 238-like Neighboring gene sorting nexin-29-like Neighboring gene uncharacterized LOC115410792 Neighboring gene transmembrane protein 238-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_043975.1 Chromosome 19 Reference fSphaOr1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
part_of 90S preribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: ribosomal L1 domain-containing protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sphaeramia orbicularis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSphaOr1.1

Genomic

  1. NC_043975.1 Reference fSphaOr1.1

    Range
    39035415..39045811 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030163647.1 → XP_030019507.1  LOW QUALITY PROTEIN: ribosomal L1 domain-containing protein 1-like

    UniProtKB/TrEMBL
    A0A673AAS4
    Conserved Domains (1) summary
    pfam00687
    Location:32 → 249
    Ribosomal_L1; Ribosomal protein L1p/L10e family
Nucleotide Protein
Heading Accession and Version

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