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tpst1 tyrosylprotein sulfotransferase 1 [ Gadus morhua (Atlantic cod) ]

Gene ID: 115561703, updated on 17-Mar-2024

Summary

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Gene symbol
tpst1
Gene description
tyrosylprotein sulfotransferase 1
See related
Ensembl:ENSGMOG00000009059
Gene type
protein coding
RefSeq status
MODEL
Organism
Gadus morhua
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Zeiogadaria; Gadariae; Gadiformes; Gadoidei; Gadidae; Gadus
Orthologs
zebrafish all
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Genomic context

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See tpst1 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
9
Annotation release Status Assembly Chr Location
100 current gadMor3.0 (GCF_902167405.1) 16 NC_044063.1 (25169111..25201645, complement)

Chromosome 16 - NC_044063.1Genomic Context describing neighboring genes Neighboring gene tumor necrosis factor, alpha-induced protein 1 (endothelial) Neighboring gene small G protein signaling modulator 2 Neighboring gene zona pellucida sperm-binding protein 3-like Neighboring gene aldehyde dehydrogenase, dimeric NADP-preferring-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044063.1 Chromosome 16 Reference gadMor3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-tyrosine sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-tyrosine sulfation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein-tyrosine sulfotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gadus morhua Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference gadMor3.0 Primary Assembly

Genomic

  1. NC_044063.1 Reference gadMor3.0 Primary Assembly

    Range
    25169111..25201645 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030381902.1 → XP_030237762.1  protein-tyrosine sulfotransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C5BQV3, A0A8C5BSA4
    Conserved Domains (1) summary
    pfam13469
    Location:77 → 267
    Sulfotransfer_3; Sulfotransferase family

  2. XM_030381903.1 → XP_030237763.1  protein-tyrosine sulfotransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C5BQV3, A0A8C5BSA4
    Conserved Domains (1) summary
    pfam13469
    Location:77 → 267
    Sulfotransfer_3; Sulfotransferase family

  3. XM_030381901.1 → XP_030237761.1  protein-tyrosine sulfotransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C5BQV3, A0A8C5BSA4
    Related
    ENSGMOP00000050345.1, ENSGMOT00000058340.1
    Conserved Domains (1) summary
    pfam13469
    Location:77 → 267
    Sulfotransfer_3; Sulfotransferase family

  4. XM_030381904.1 → XP_030237764.1  protein-tyrosine sulfotransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C5AVC7, A0A8C5BYP5
    Related
    ENSGMOP00000054875.1, ENSGMOT00000057687.1
    Conserved Domains (1) summary
    pfam13469
    Location:77 → 267
    Sulfotransfer_3; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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