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abcc5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5 [ Sparus aurata (gilthead seabream) ]

Gene ID: 115566197, updated on 17-Mar-2024

Summary

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Gene symbol
abcc5
Gene description
ATP-binding cassette, sub-family C (CFTR/MRP), member 5
See related
Ensembl:ENSSAUG00010000333
Gene type
protein coding
RefSeq status
MODEL
Organism
Sparus aurata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Spariformes; Sparidae; Sparus
Orthologs
human zebrafish all
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Genomic context

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See abcc5 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
31
Annotation release Status Assembly Chr Location
100 current fSpaAur1.1 (GCF_900880675.1) 2 NC_044188.1 (376002..397451, complement)

Chromosome 2 - NC_044188.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 11A1-like Neighboring gene uncharacterized LOC115566303 Neighboring gene ATP-binding cassette, sub-family G (WHITE), member 1 Neighboring gene ribosomal protein L35a Neighboring gene leucine-rich repeat and calponin homology domain-containing protein 3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044188.1 Chromosome 2 Reference fSpaAur1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
multidrug resistance-associated protein 5
Names
ATP binding cassette subfamily C member 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sparus aurata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSpaAur1.1 Primary Assembly

Genomic

  1. NC_044188.1 Reference fSpaAur1.1 Primary Assembly

    Range
    376002..397451 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030391971.1 → XP_030247831.1  multidrug resistance-associated protein 5 isoform X2

    UniProtKB/TrEMBL
    A0A671TFP0
    Related
    ENSSAUP00010000709.1, ENSSAUT00010000752.1
    Conserved Domains (1) summary
    TIGR00957
    Location:66 → 1376
    MRP_assoc_pro; multi drug resistance-associated protein (MRP)

  2. XM_030391963.1 → XP_030247823.1  multidrug resistance-associated protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A671TFP0, A0A671TH57
    Conserved Domains (1) summary
    TIGR00957
    Location:68 → 1378
    MRP_assoc_pro; multi drug resistance-associated protein (MRP)

  3. XM_030391953.1 → XP_030247813.1  multidrug resistance-associated protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A671TFP0, A0A671TH57
    Related
    ENSSAUP00010000591.1, ENSSAUT00010000630.1
    Conserved Domains (1) summary
    TIGR00957
    Location:68 → 1378
    MRP_assoc_pro; multi drug resistance-associated protein (MRP)

  4. XM_030391978.1 → XP_030247838.1  multidrug resistance-associated protein 5 isoform X3

    UniProtKB/TrEMBL
    A0A671TEH9
    Related
    ENSSAUP00010000646.1, ENSSAUT00010000689.1
    Conserved Domains (1) summary
    TIGR00957
    Location:136 → 1296
    MRP_assoc_pro; multi drug resistance-associated protein (MRP)
Nucleotide Protein
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