U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

prdx1 peroxiredoxin 1 [ Sparus aurata (gilthead seabream) ]

Gene ID: 115573364, updated on 17-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
prdx1
Gene description
peroxiredoxin 1
See related
Ensembl:ENSSAUG00010007435
Gene type
protein coding
RefSeq status
MODEL
Organism
Sparus aurata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Spariformes; Sparidae; Sparus
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See prdx1 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
6
Annotation release Status Assembly Chr Location
100 current fSpaAur1.1 (GCF_900880675.1) 21 NC_044207.1 (10388217..10392742)

Chromosome 21 - NC_044207.1Genomic Context describing neighboring genes Neighboring gene GC-rich promoter binding protein 1-like 1 Neighboring gene histone-binding protein N1/N2-like Neighboring gene zebrafish testis-expressed 38 Neighboring gene aldehyde dehydrogenase 9 family, member A1b Neighboring gene uridine-cytidine kinase 2b

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_044207.1 Chromosome 21 Reference fSpaAur1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Molecular characterization and expression analysis of six peroxiredoxin paralogous genes in gilthead sea bream (Sparus aurata): insights from fish exposed to dietary, pathogen and confinement stressors. Pérez-Sánchez J, et al. Fish Shellfish Immunol, 2011 Aug. PMID 21640832
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables thioredoxin peroxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell redox homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hydrogen peroxide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in leukocyte activation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in removal of superoxide radicals IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
peroxiredoxin-1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Sparus aurata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSpaAur1.1 Primary Assembly

Genomic

  1. NC_044207.1 Reference fSpaAur1.1 Primary Assembly

    Range
    10388217..10392742
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030404115.1 → XP_030259975.1  peroxiredoxin-1

    UniProtKB/TrEMBL
    A0A671UQR2, G0T332
    Related
    ENSSAUP00010016091.1, ENSSAUT00010017055.1
    Conserved Domains (1) summary
    cd03015
    Location:8 → 180
    PRX_Typ2cys; Peroxiredoxin (PRX) family, Typical 2-Cys PRX subfamily; PRXs are thiol-specific antioxidant (TSA) proteins, which confer a protective role in cells through its peroxidase activity by reducing hydrogen peroxide, peroxynitrite, and organic hydroperoxides. ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.