U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

cat catalase [ Sparus aurata (gilthead seabream) ]

Gene ID: 115586278, updated on 17-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
cat
Gene description
catalase
See related
Ensembl:ENSSAUG00010005803
Gene type
protein coding
RefSeq status
MODEL
Organism
Sparus aurata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Spariformes; Sparidae; Sparus
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See cat in Genome Data Viewer
Location:
chromosome: 8
Exon count:
13
Annotation release Status Assembly Chr Location
100 current fSpaAur1.1 (GCF_900880675.1) 8 NC_044194.1 (18769169..18782105, complement)

Chromosome 8 - NC_044194.1Genomic Context describing neighboring genes Neighboring gene dispanin subfamily A member 2b-like Neighboring gene interferon-induced transmembrane protein 3-like Neighboring gene synaptotagmin XII Neighboring gene pseudopodium-enriched atypical kinase 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_044194.1 Chromosome 8 Reference fSpaAur1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Dietary oils mediate cortisol kinetics and the hepatic mRNA expression profile of stress-responsive genes in gilthead sea bream (Sparus aurata) exposed to crowding stress. Implications on energy homeostasis and stress susceptibility. Pérez-Sánchez J, et al. Comp Biochem Physiol Part D Genomics Proteomics, 2013 Jun. PMID 23466468
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hydrogen peroxide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to hydrogen peroxide IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
catalase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Sparus aurata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSpaAur1.1 Primary Assembly

Genomic

  1. NC_044194.1 Reference fSpaAur1.1 Primary Assembly

    Range
    18769169..18782105 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030425175.1 → XP_030281035.1  catalase isoform X2

    UniProtKB/TrEMBL
    A0A671V6K7
    Related
    ENSSAUP00010021935.1, ENSSAUT00010023172.1
    Conserved Domains (1) summary
    cd08156
    Location:68 → 497
    catalase_clade_3; Clade 3 of the heme-binding enzyme catalase

  2. XM_030425174.1 → XP_030281034.1  catalase isoform X1

    UniProtKB/TrEMBL
    A0A671V6K7, M9P0A8
    Related
    ENSSAUP00010021011.1, ENSSAUT00010022197.1
    Conserved Domains (1) summary
    cd08156
    Location:68 → 497
    catalase_clade_3; Clade 3 of the heme-binding enzyme catalase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.