U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

BCAS3 BCAS3 microtubule associated cell migration factor [ Gopherus evgoodei (Goodes thornscrub tortoise) ]

Gene ID: 115636725, updated on 17-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
BCAS3
Gene description
BCAS3 microtubule associated cell migration factor
See related
Ensembl:ENSGEVG00005011495
Gene type
protein coding
RefSeq status
MODEL
Organism
Gopherus evgoodei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Testudinidae; Gopherus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See BCAS3 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
29
Annotation release Status Assembly Chr Location
100 current rGopEvg1_v1.p (GCF_007399415.2) 17 NC_044338.1 (6184708..6673307, complement)

Chromosome 17 - NC_044338.1Genomic Context describing neighboring genes Neighboring gene T-box transcription factor 4 Neighboring gene T-box transcription factor 2 Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1D Neighboring gene amyloid beta precursor protein binding protein 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_044338.1 Chromosome 17 Reference rGopEvg1_v1.p Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
breast carcinoma-amplified sequence 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gopherus evgoodei Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rGopEvg1_v1.p Primary Assembly

Genomic

  1. NC_044338.1 Reference rGopEvg1_v1.p Primary Assembly

    Range
    6184708..6673307 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030537160.1 → XP_030393020.1  breast carcinoma-amplified sequence 3 isoform X2

    UniProtKB/TrEMBL
    A0A8C4WEG2, A0A8C4WHZ5
    Conserved Domains (3) summary
    sd00039
    Location:350 → 390
    7WD40; WD40 repeat [structural motif]
    pfam12490
    Location:517 → 752
    BCAS3; Breast carcinoma amplified sequence 3
    cl29593
    Location:340 → 445
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_030537161.1 → XP_030393021.1  breast carcinoma-amplified sequence 3 isoform X3

    UniProtKB/TrEMBL
    A0A8C4WEG2, A0A8C4WHZ5
    Conserved Domains (3) summary
    sd00039
    Location:350 → 390
    7WD40; WD40 repeat [structural motif]
    pfam12490
    Location:517 → 737
    BCAS3; Breast carcinoma amplified sequence 3
    cl29593
    Location:340 → 445
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  3. XM_030537162.1 → XP_030393022.1  breast carcinoma-amplified sequence 3 isoform X4

    UniProtKB/TrEMBL
    A0A8C4WEG2, A0A8C4WHZ5
    Conserved Domains (3) summary
    sd00039
    Location:350 → 390
    7WD40; WD40 repeat [structural motif]
    pfam12490
    Location:517 → 752
    BCAS3; Breast carcinoma amplified sequence 3
    cl29593
    Location:340 → 445
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  4. XM_030537163.1 → XP_030393023.1  breast carcinoma-amplified sequence 3 isoform X5

    UniProtKB/TrEMBL
    A0A8C4WEG2, A0A8C4WHZ5
    Conserved Domains (3) summary
    sd00039
    Location:350 → 390
    7WD40; WD40 repeat [structural motif]
    pfam12490
    Location:517 → 737
    BCAS3; Breast carcinoma amplified sequence 3
    cl29593
    Location:340 → 445
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  5. XM_030537164.1 → XP_030393024.1  breast carcinoma-amplified sequence 3 isoform X6

    UniProtKB/TrEMBL
    A0A8C4WEG2, A0A8C4WHZ5
    Conserved Domains (3) summary
    sd00039
    Location:350 → 390
    7WD40; WD40 repeat [structural motif]
    pfam12490
    Location:517 → 752
    BCAS3; Breast carcinoma amplified sequence 3
    cl29593
    Location:340 → 445
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  6. XM_030537165.1 → XP_030393025.1  breast carcinoma-amplified sequence 3 isoform X7

    UniProtKB/TrEMBL
    A0A8C4WEG2, A0A8C4WHZ5
    Conserved Domains (3) summary
    sd00039
    Location:350 → 390
    7WD40; WD40 repeat [structural motif]
    pfam12490
    Location:517 → 737
    BCAS3; Breast carcinoma amplified sequence 3
    cl29593
    Location:340 → 445
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  7. XM_030537159.1 → XP_030393019.1  breast carcinoma-amplified sequence 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C4WEG2, A0A8C4WHZ5
    Conserved Domains (2) summary
    pfam12490
    Location:517 → 737
    BCAS3; Breast carcinoma amplified sequence 3
    cl29593
    Location:340 → 445
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  8. XM_030537167.1 → XP_030393027.1  breast carcinoma-amplified sequence 3 isoform X8

    UniProtKB/TrEMBL
    A0A8C4WIM2
    Related
    ENSGEVP00005016271.1, ENSGEVT00005017090.1
    Conserved Domains (3) summary
    sd00039
    Location:350 → 390
    7WD40; WD40 repeat [structural motif]
    pfam12490
    Location:517 → 752
    BCAS3; Breast carcinoma amplified sequence 3
    cl29593
    Location:340 → 445
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.