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LOC115849627 probable ubiquitin carboxyl-terminal hydrolase FAF-X [ Globicephala melas (long-finned pilot whale) ]

Gene ID: 115849627, updated on 30-Nov-2023

Summary

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Gene symbol
LOC115849627
Gene description
probable ubiquitin carboxyl-terminal hydrolase FAF-X
See related
EnsemblRapid:ENSGMEG00000012016
Gene type
protein coding
RefSeq status
MODEL
Organism
Globicephala melas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Globicephala
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Genomic context

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See LOC115849627 in Genome Data Viewer
Location:
chromosome: Y
Exon count:
45
Annotation release Status Assembly Chr Location
RS_2023_10 current mGloMel1.1 (GCF_963455315.1) Y NC_083336.1 (281984..427905, complement)
100 previous assembly ASM654740v1 (GCF_006547405.1) Unplaced Scaffold NW_022135104.1 (283866..428729, complement)

Chromosome Y - NC_083336.1Genomic Context describing neighboring genes Neighboring gene lysine-specific demethylase 6A-like Neighboring gene shieldin complex subunit 1-like Neighboring gene ATP-dependent RNA helicase DDX3X Neighboring gene zinc finger protein 397-like Neighboring gene F-box only protein 28-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable ubiquitin carboxyl-terminal hydrolase FAF-X

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963455315.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mGloMel1.1 Primary Assembly

Genomic

  1. NC_083336.1 Reference mGloMel1.1 Primary Assembly

    Range
    281984..427905 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060293114.1 → XP_060149097.1  probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X2

  2. XM_030851098.2 → XP_030706958.1  probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1

    Related
    ENSGMEP00000016924.1
Nucleotide Protein
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