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LOC115877765 hexosaminidase D-like [ Sitophilus oryzae (rice weevil) ]

Gene ID: 115877765, updated on 14-Dec-2023

Summary

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Gene symbol
LOC115877765
Gene description
hexosaminidase D-like
See related
EnsemblRapid:LOC115877765
Gene type
protein coding
RefSeq status
MODEL
Organism
Sitophilus oryzae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Curculionidae; Dryophthorinae; Sitophilus
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Genomic context

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See LOC115877765 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
100 current Soryzae_2.0 (GCF_002938485.1) Unplaced Scaffold NW_022146167.1 (2999592..3036922, complement)

NW_022146167.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase RNF185-like Neighboring gene dihydrolipoyl dehydrogenase, mitochondrial Neighboring gene cell division control protein 42 homolog Neighboring gene uncharacterized LOC115877767

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022146167 Unplaced Scaffold Reference Soryzae_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosaminidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hexosaminidase D-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sitophilus oryzae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Soryzae_2.0 Primary Assembly

Genomic

  1. NW_022146167.1 Reference Soryzae_2.0 Primary Assembly

    Range
    2999592..3036922 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030894075.1 → XP_030749935.1  hexosaminidase D-like isoform X1

    UniProtKB/TrEMBL
    A0A6J2XG72
    Related
    XP_030749935.1, XM_030894075.1
    Conserved Domains (1) summary
    cd06565
    Location:143 → 452
    GH20_GcnA-like; Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins. GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine ...

  2. XM_030894076.1 → XP_030749936.1  hexosaminidase D-like isoform X2

    UniProtKB/TrEMBL
    A0A6J2XFL0
    Related
    XP_030749936.1, XM_030894076.1
    Conserved Domains (1) summary
    cd06565
    Location:48 → 357
    GH20_GcnA-like; Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins. GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine ...
Nucleotide Protein
Heading Accession and Version

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