U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MIR223HG MIR223 host gene [ Homo sapiens (human) ]

Gene ID: 115891964, updated on 10-Oct-2023

Summary

Go to the top of the page Help
Official Symbol
MIR223HGprovided by HGNC
Official Full Name
MIR223 host geneprovided by HGNC
Primary source
HGNC:HGNC:54520
See related
Ensembl:ENSG00000274536 AllianceGenome:HGNC:54520
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
linc-223
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See MIR223HG in Genome Data Viewer
Location:
Xq12
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (66015461..66020426)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (64441957..64446922)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (65235303..65240268)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20883 Neighboring gene ReSE screen-validated silencer GRCh37_chrX:65048753-65048965 Neighboring gene cyclin Y like 5 (pseudogene) Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29718 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chrX:65151966-65153165 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:65190667-65191168 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:65191169-65191668 Neighboring gene RBMX pseudogene 5 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29719 Neighboring gene Sharpr-MPRA regulatory region 12317 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29720 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chrX:65252367-65253566 Neighboring gene microRNA 223 Neighboring gene V-set and immunoglobulin domain containing 4 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29721 Neighboring gene ATXN7L3 pseudogene 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The Fusion of CLEC12A and MIR223HG Arises from a trans-Splicing Event in Normal and Transformed Human Cells. Dhungel BP, et al. Int J Mol Sci, 2021 Nov 10. PMID 34830054, Free PMC Article
  2. [Expressing of linc-223 and miR-125a in Patients with Acute Leukemia and Its Clinical Significance]. Liu AF, et al. Zhongguo Shi Yan Xue Ye Xue Za Zhi, 2020 Dec. PMID 33283704
  3. The miR-223 host non-coding transcript linc-223 induces IRF4 expression in acute myeloid leukemia by acting as a competing endogenous RNA. Mangiavacchi A, et al. Oncotarget, 2016 Sep 13. PMID 27517498, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The Fusion of CLEC12A and MIR223HG Arises from a trans-Splicing Event in Normal and Transformed Human Cells.
    Title: The Fusion of CLEC12A and MIR223HG Arises from a trans-Splicing Event in Normal and Transformed Human Cells.
  2. [Expressing of linc-223 and miR-125a in Patients with Acute Leukemia and Its Clinical Significance].
    Title: [Expressing of linc-223 and miR-125a in Patients with Acute Leukemia and Its Clinical Significance].
Submit: New GeneRIF Correction

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See variants in ClinVar

See Variation Viewer (GRCh37.p13)

Pathways from PubChem

Go to the top of the page

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_170299.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL034397
    Related
    ENST00000621933.3

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    66015461..66020426
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    64441957..64446922
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases