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LOC115995491 chaperone protein dnaJ 49 [ Quercus lobata ]

Gene ID: 115995491, updated on 25-Jan-2024

Summary

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Gene symbol
LOC115995491
Gene description
chaperone protein dnaJ 49
Gene type
protein coding
RefSeq status
MODEL
Organism
Quercus lobata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Genomic context

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See LOC115995491 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ValleyOak3.0 (GCF_001633185.1) 6 NC_044909.1 (9580154..9583238)

Chromosome 6 - NC_044909.1Genomic Context describing neighboring genes Neighboring gene desiccation-related protein PCC13-62-like Neighboring gene desiccation-related protein PCC13-62-like Neighboring gene uncharacterized LOC115995391 Neighboring gene uncharacterized LOC115993750

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044909.1 Chromosome 6 Reference ValleyOak3.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to misfolded protein IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chaperone cofactor-dependent protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chaperone protein dnaJ 49

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Quercus lobata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ValleyOak3.0

Genomic

  1. NC_044909.1 Reference ValleyOak3.0

    Range
    9580154..9583238
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031120076.1 → XP_030975936.1  chaperone protein dnaJ 49

    UniProtKB/TrEMBL
    A0A7N2LUX6
    Conserved Domains (4) summary
    PRK14291
    Location:104 → 232
    PRK14291; chaperone protein DnaJ; Provisional
    pfam00226
    Location:105 → 166
    DnaJ; DnaJ domain
    pfam09320
    Location:260 → 345
    DUF1977; Domain of unknown function (DUF1977)
    cl11961
    Location:2 → 61
    ALDH-SF; NAD(P)+-dependent aldehyde dehydrogenase superfamily

  2. XM_031120078.1 → XP_030975938.1  chaperone protein dnaJ 49

    UniProtKB/TrEMBL
    A0A7N2LUX6
    Conserved Domains (4) summary
    PRK14291
    Location:104 → 232
    PRK14291; chaperone protein DnaJ; Provisional
    pfam00226
    Location:105 → 166
    DnaJ; DnaJ domain
    pfam09320
    Location:260 → 345
    DUF1977; Domain of unknown function (DUF1977)
    cl11961
    Location:2 → 61
    ALDH-SF; NAD(P)+-dependent aldehyde dehydrogenase superfamily

  3. XM_031120077.1 → XP_030975937.1  chaperone protein dnaJ 49

    UniProtKB/TrEMBL
    A0A7N2LUX6
    Conserved Domains (4) summary
    PRK14291
    Location:104 → 232
    PRK14291; chaperone protein DnaJ; Provisional
    pfam00226
    Location:105 → 166
    DnaJ; DnaJ domain
    pfam09320
    Location:260 → 345
    DUF1977; Domain of unknown function (DUF1977)
    cl11961
    Location:2 → 61
    ALDH-SF; NAD(P)+-dependent aldehyde dehydrogenase superfamily
Nucleotide Protein
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