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LOC115995496 malate dehydrogenase, glyoxysomal-like [ Quercus lobata ]

Gene ID: 115995496, updated on 26-Jun-2024

Summary

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Gene symbol
LOC115995496
Gene description
malate dehydrogenase, glyoxysomal-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Quercus lobata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Genomic context

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See LOC115995496 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ValleyOak3.0 (GCF_001633185.1) 6 NC_044909.1 (37994806..38000892, complement)

Chromosome 6 - NC_044909.1Genomic Context describing neighboring genes Neighboring gene UDP-glucuronate 4-epimerase 2-like Neighboring gene leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 Neighboring gene LRR receptor-like serine/threonine-protein kinase HSL2 Neighboring gene uncharacterized LOC115950237

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044909.1 Chromosome 6 Reference ValleyOak3.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-malate dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in malate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
malate dehydrogenase, glyoxysomal-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Quercus lobata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ValleyOak3.0

Genomic

  1. NC_044909.1 Reference ValleyOak3.0

    Range
    37994806..38000892 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031120083.1 → XP_030975943.1  malate dehydrogenase, glyoxysomal-like

    UniProtKB/TrEMBL
    A0A7N2LYZ7
    Conserved Domains (1) summary
    PLN00106
    Location:34 → 351
    PLN00106; malate dehydrogenase
Nucleotide Protein
Heading Accession and Version

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