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LOC116405927 endoglucanase 9-like [ Cucumis sativus (cucumber) ]

Gene ID: 116405927, updated on 14-Dec-2023

Summary

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Gene symbol
LOC116405927
Gene description
endoglucanase 9-like
Locus tag
Csa_019838
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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See LOC116405927 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Annotation release Status Assembly Chr Location
102 current Cucumber_9930_V3 (GCF_000004075.3) 1 NC_026655.2 (20045282..20048665)

Chromosome 1 - NC_026655.2Genomic Context describing neighboring genes Neighboring gene dynamin-related protein 4C Neighboring gene probable LRR receptor-like serine/threonine-protein kinase RFK1 Neighboring gene uncharacterized LOC116405937 Neighboring gene uncharacterized LOC101212249 Neighboring gene BES1/BZR1 homolog protein 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_026655.2 Chromosome 1 Reference Cucumber_9930_V3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endoglucanase 9-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cucumber_9930_V3 Primary Assembly

Genomic

  1. NC_026655.2 Reference Cucumber_9930_V3 Primary Assembly

    Range
    20045282..20048665
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031889675.1 → XP_031745535.1  endoglucanase 9-like

    Conserved Domains (1) summary
    cl02959
    Location:20 → 482
    Glyco_hydro_9; Glycosyl hydrolase family 9
Nucleotide Protein
Heading Accession and Version

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