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LOC116406420 protein-tyrosine sulfotransferase-like [ Cucumis sativus (cucumber) ]

Gene ID: 116406420, updated on 14-Dec-2023

Summary

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Gene symbol
LOC116406420
Gene description
protein-tyrosine sulfotransferase-like
Locus tag
Csa_022760
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucumis sativus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Genomic context

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See LOC116406420 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
102 current Cucumber_9930_V3 (GCF_000004075.3) 1 NC_026655.2 (9432690..9443159)

Chromosome 1 - NC_026655.2Genomic Context describing neighboring genes Neighboring gene protein-tyrosine sulfotransferase-like Neighboring gene uncharacterized LOC116406422 Neighboring gene ubiquitin-like protein 5 Neighboring gene 50S ribosomal protein L19, chloroplastic

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_026655.2 Chromosome 1 Reference Cucumber_9930_V3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein-tyrosine sulfotransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cucumber_9930_V3 Primary Assembly

Genomic

  1. NC_026655.2 Reference Cucumber_9930_V3 Primary Assembly

    Range
    9432690..9443159
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031890148.1 → XP_031746008.1  protein-tyrosine sulfotransferase-like isoform X3

  2. XM_031890146.1 → XP_031746006.1  protein-tyrosine sulfotransferase-like isoform X1

  3. XM_031890147.1 → XP_031746007.1  protein-tyrosine sulfotransferase-like isoform X2

Nucleotide Protein
Heading Accession and Version

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