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RAD54L2 RAD54 like 2 [ Corvus moneduloides (New Caledonian crow) ]

Gene ID: 116449659, updated on 3-Aug-2024

Summary

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Gene symbol
RAD54L2
Gene description
RAD54 like 2
See related
Ensembl:ENSCMUG00005012308
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus moneduloides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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See RAD54L2 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
24
Annotation release Status Assembly Chr Location
100 current bCorMon1.pri (GCF_009650955.1) 11 NC_045486.1 (17787453..17855746)

Chromosome 11 - NC_045486.1Genomic Context describing neighboring genes Neighboring gene RNA binding motif protein 15B Neighboring gene DDB1 and CUL4 associated factor 1 Neighboring gene semaphorin-3D-like Neighboring gene RNA binding motif protein 6 Neighboring gene MON1 homolog A, secretory trafficking associated

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045486.1 Chromosome 11 Reference bCorMon1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent chromatin remodeler activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
helicase ARIP4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus moneduloides Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCorMon1.pri

Genomic

  1. NC_045486.1 Reference bCorMon1.pri

    Range
    17787453..17855746
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032121376.1 → XP_031977267.1  helicase ARIP4 isoform X1

    UniProtKB/TrEMBL
    A0A851W6X7, A0A8C3EVR0, A0A8U7NLX3
    Conserved Domains (3) summary
    COG0553
    Location:249 → 916
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    cd18069
    Location:281 → 557
    DEXHc_ARIP4; DEXH-box helicase domain of ARIP4
    cl25407
    Location:86 → 149
    ClassIIa_HDAC_Gln-rich-N; Glutamine-rich N-terminal helical domain of various Class IIa histone deacetylases (HDAC4, HDAC5 and HDCA9)

  2. XM_032121380.1 → XP_031977271.1  helicase ARIP4 isoform X3

    UniProtKB/TrEMBL
    A0A851W6X7
    Conserved Domains (2) summary
    COG0553
    Location:249 → 916
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    cd18069
    Location:281 → 557
    DEXHc_ARIP4; DEXH-box helicase domain of ARIP4

  3. XM_032121378.1 → XP_031977269.1  helicase ARIP4 isoform X1

    UniProtKB/TrEMBL
    A0A851W6X7, A0A8C3EVR0, A0A8U7NLX3
    Related
    ENSCMUP00005019959.1, ENSCMUT00005021368.1
    Conserved Domains (3) summary
    COG0553
    Location:249 → 916
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    cd18069
    Location:281 → 557
    DEXHc_ARIP4; DEXH-box helicase domain of ARIP4
    cl25407
    Location:86 → 149
    ClassIIa_HDAC_Gln-rich-N; Glutamine-rich N-terminal helical domain of various Class IIa histone deacetylases (HDAC4, HDAC5 and HDCA9)

  4. XM_032121379.1 → XP_031977270.1  helicase ARIP4 isoform X2

    UniProtKB/TrEMBL
    A0A851W6X7, A0A8C3H492, A0A8U7NKW4
    Related
    ENSCMUP00005019995.1, ENSCMUT00005021404.1
    Conserved Domains (3) summary
    COG0553
    Location:210 → 877
    HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    cd18069
    Location:242 → 518
    DEXHc_ARIP4; DEXH-box helicase domain of ARIP4
    cl25407
    Location:47 → 110
    ClassIIa_HDAC_Gln-rich-N; Glutamine-rich N-terminal helical domain of various Class IIa histone deacetylases (HDAC4, HDAC5 and HDCA9)
Nucleotide Protein
Heading Accession and Version

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