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LOC116621176 protein snail homolog Sna [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 116621176, updated on 30-Nov-2023

Summary

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Gene symbol
LOC116621176
Gene description
protein snail homolog Sna
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
Also known as
SnailA
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Genomic context

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See LOC116621176 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 1 NC_064034.1 (4914947..4916925)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834382.1 (1315760..1317693)

Chromosome 1 - NC_064034.1Genomic Context describing neighboring genes Neighboring gene B-cell receptor-associated protein 31 Neighboring gene striatin-interacting protein 1 homolog Neighboring gene uncharacterized LOC116621183 Neighboring gene uncharacterized LOC116621181 Neighboring gene uncharacterized LOC116621146

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of forkhead and snail expression reveals epithelial-mesenchymal transitions during embryonic and larval development of Nematostella vectensis. Fritzenwanker JH, et al. Dev Biol, 2004 Nov 15. PMID 15501226
  2. Investigating the origins of triploblasty: 'mesodermal' gene expression in a diploblastic animal, the sea anemone Nematostella vectensis (phylum, Cnidaria; class, Anthozoa). Martindale MQ, et al. Development, 2004 May. PMID 15128674

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein snail homolog Sna
Names
snail Zn-finger protein A
snail family zinc-finger protein A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064034.1 Reference jaNemVect1.1

    Range
    4914947..4916925
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032387186.2 → XP_032243077.1  protein snail homolog Sna

    UniProtKB/TrEMBL
    Q6DNH7
    Conserved Domains (2) summary
    COG5048
    Location:183 → 232
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:158 → 178
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

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