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LOC116621199 supervillin [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 116621199, updated on 30-Nov-2023

Summary

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Gene symbol
LOC116621199
Gene description
supervillin
Locus tag
NEMVEDRAFT_v1g221469
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
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Genomic context

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See LOC116621199 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
25
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 1 NC_064034.1 (4322467..4348492)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834382.1 (711853..739850)

Chromosome 1 - NC_064034.1Genomic Context describing neighboring genes Neighboring gene sulfite oxidase Neighboring gene uncharacterized LOC5517127 Neighboring gene uncharacterized LOC125561925 Neighboring gene uncharacterized LOC5499469 Neighboring gene uncharacterized LOC116621190

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-4,5-bisphosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament severing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in actin polymerization or depolymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in barbed-end actin filament capping IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
supervillin
Names
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064034.1 Reference jaNemVect1.1

    Range
    4322467..4348492
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048726680.1 → XP_048582637.1  supervillin isoform X4

  2. XM_048726572.1 → XP_048582529.1  supervillin isoform X1

  3. XM_048726605.1 → XP_048582562.1  supervillin isoform X2

  4. XM_048726652.1 → XP_048582609.1  supervillin isoform X3

Nucleotide Protein
Heading Accession and Version

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