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SPRN shadow of prion protein [ Chiroxiphia lanceolata (lance-tailed manakin) ]

Gene ID: 116790614, updated on 3-Aug-2024

Summary

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Gene symbol
SPRN
Gene description
shadow of prion protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Chiroxiphia lanceolata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Chiroxiphia
Orthologs
human mouse all
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Genomic context

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See SPRN in Genome Data Viewer
Location:
chromosome: 8
Exon count:
2
Annotation release Status Assembly Chr Location
100 current bChiLan1.pri (GCF_009829145.1) 8 NC_045644.1 (37015439..37016800, complement)

Chromosome 8 - NC_045644.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 511 Neighboring gene polyamine oxidase Neighboring gene mitochondrial ribosome associated GTPase 1 Neighboring gene enoyl-CoA hydratase, short chain 1 Neighboring gene uncharacterized LOC116790615

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045644.1 Chromosome 8 Reference bChiLan1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
shadow of prion protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chiroxiphia lanceolata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bChiLan1.pri

Genomic

  1. NC_045644.1 Reference bChiLan1.pri

    Range
    37015439..37016800 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032695731.1 → XP_032551622.1  shadow of prion protein

Nucleotide Protein
Heading Accession and Version

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