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ADAM8 ADAM metallopeptidase domain 8 [ Chiroxiphia lanceolata (lance-tailed manakin) ]

Gene ID: 116790617, updated on 3-Aug-2024

Summary

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Gene symbol
ADAM8
Gene description
ADAM metallopeptidase domain 8
Gene type
protein coding
RefSeq status
MODEL
Organism
Chiroxiphia lanceolata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Chiroxiphia
Orthologs
human mouse all
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Genomic context

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See ADAM8 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
22
Annotation release Status Assembly Chr Location
100 current bChiLan1.pri (GCF_009829145.1) 8 NC_045644.1 (37049126..37061848)

Chromosome 8 - NC_045644.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 511 Neighboring gene uncharacterized LOC116790615 Neighboring gene tubulin gamma complex component 2 Neighboring gene ER lipid raft associated 1 Neighboring gene component of inhibitor of nuclear factor kappa B kinase complex Neighboring gene CWF19 like cell cycle control factor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045644.1 Chromosome 8 Reference bChiLan1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cellular extravasation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of membrane protein ectodomain proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
disintegrin and metalloproteinase domain-containing protein 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chiroxiphia lanceolata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bChiLan1.pri

Genomic

  1. NC_045644.1 Reference bChiLan1.pri

    Range
    37049126..37061848
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032695735.1 → XP_032551626.1  disintegrin and metalloproteinase domain-containing protein 8

    Conserved Domains (5) summary
    smart00050
    Location:720 → 794
    DISIN; Homologues of snake disintegrins
    smart00608
    Location:797 → 931
    ACR; ADAM Cysteine-Rich Domain
    cd04269
    Location:503 → 701
    ZnMc_adamalysin_II_like; Zinc-dependent metalloprotease; adamalysin_II_like subfamily. Adamalysin II is a snake venom zinc endopeptidase. This subfamily contains other snake venom metalloproteinases, as well as membrane-anchored metalloproteases belonging to the ADAM family. ...
    pfam15402
    Location:1012 → 1147
    Spc7_N; N-terminus of kinetochore NMS complex subunit Spc7
    pfam01562
    Location:333 → 457
    Pep_M12B_propep; Reprolysin family propeptide
Nucleotide Protein
Heading Accession and Version

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