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CDC42BPB CDC42 binding protein kinase beta [ Lacerta agilis ]

Gene ID: 117040984, updated on 19-Mar-2024

Summary

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Gene symbol
CDC42BPB
Gene description
CDC42 binding protein kinase beta
See related
EnsemblRapid:ENSLAGG00000018144
Gene type
protein coding
RefSeq status
MODEL
Organism
Lacerta agilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Laterata; Lacertibaenia; Lacertidae; Lacerta
Orthologs
human mouse all
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Genomic context

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See CDC42BPB in Genome Data Viewer
Location:
chromosome: 1
Exon count:
38
Annotation release Status Assembly Chr Location
100 current rLacAgi1.pri (GCF_009819535.1) 1 NC_046312.1 (14102696..14204879)

Chromosome 1 - NC_046312.1Genomic Context describing neighboring genes Neighboring gene exocyst complex component 3 like 4 Neighboring gene LBH domain containing 2 Neighboring gene amnion associated transmembrane protein Neighboring gene TNF receptor associated factor 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046312.1 Chromosome 1 Reference rLacAgi1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actomyosin structure organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-threonine phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein kinase MRCK beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lacerta agilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rLacAgi1.pri Primary Assembly

Genomic

  1. NC_046312.1 Reference rLacAgi1.pri Primary Assembly

    Range
    14102696..14204879
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033139197.1 → XP_032995088.1  serine/threonine-protein kinase MRCK beta isoform X1

    Conserved Domains (6) summary
    COG0419
    Location:425 → 935
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    cd01243
    Location:1104 → 1238
    PH_MRCK; MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain
    pfam00780
    Location:1264 → 1526
    CNH; CNH domain
    pfam15796
    Location:529 → 607
    KELK; KELK-motif containing domain of MRCK Ser/Thr protein kinase
    cd20865
    Location:1045 → 1097
    C1_MRCKbeta; protein kinase C conserved region 1 (C1 domain) found in myotonic dystrophy kinase-related Cdc42-binding kinase beta (MRCK beta) and similar proteins
    cl21453
    Location:3 → 412
    PKc_like; Protein Kinases, catalytic domain

  2. XM_033139208.1 → XP_032995099.1  serine/threonine-protein kinase MRCK beta isoform X2

    Conserved Domains (6) summary
    COG0419
    Location:425 → 935
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    cd01243
    Location:1104 → 1238
    PH_MRCK; MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain
    pfam00780
    Location:1264 → 1526
    CNH; CNH domain
    pfam15796
    Location:529 → 607
    KELK; KELK-motif containing domain of MRCK Ser/Thr protein kinase
    cd20865
    Location:1045 → 1097
    C1_MRCKbeta; protein kinase C conserved region 1 (C1 domain) found in myotonic dystrophy kinase-related Cdc42-binding kinase beta (MRCK beta) and similar proteins
    cl21453
    Location:3 → 412
    PKc_like; Protein Kinases, catalytic domain

  3. XM_033139234.1 → XP_032995125.1  serine/threonine-protein kinase MRCK beta isoform X5

    Conserved Domains (6) summary
    COG0419
    Location:425 → 935
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    cd01243
    Location:1079 → 1213
    PH_MRCK; MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain
    pfam00780
    Location:1239 → 1501
    CNH; CNH domain
    pfam15796
    Location:529 → 607
    KELK; KELK-motif containing domain of MRCK Ser/Thr protein kinase
    cd20865
    Location:1020 → 1072
    C1_MRCKbeta; protein kinase C conserved region 1 (C1 domain) found in myotonic dystrophy kinase-related Cdc42-binding kinase beta (MRCK beta) and similar proteins
    cl21453
    Location:3 → 412
    PKc_like; Protein Kinases, catalytic domain

  4. XM_033139216.1 → XP_032995107.1  serine/threonine-protein kinase MRCK beta isoform X3

    Related
    ENSLAGP00000025253.1, ENSLAGT00000027064.1
    Conserved Domains (6) summary
    COG0419
    Location:425 → 935
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    cd01243
    Location:1087 → 1221
    PH_MRCK; MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain
    pfam00780
    Location:1247 → 1509
    CNH; CNH domain
    pfam15796
    Location:529 → 607
    KELK; KELK-motif containing domain of MRCK Ser/Thr protein kinase
    cd20865
    Location:1028 → 1080
    C1_MRCKbeta; protein kinase C conserved region 1 (C1 domain) found in myotonic dystrophy kinase-related Cdc42-binding kinase beta (MRCK beta) and similar proteins
    cl21453
    Location:3 → 412
    PKc_like; Protein Kinases, catalytic domain

  5. XM_033139226.1 → XP_032995117.1  serine/threonine-protein kinase MRCK beta isoform X4

    Conserved Domains (6) summary
    COG0419
    Location:425 → 935
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    cd01243
    Location:1087 → 1221
    PH_MRCK; MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain
    pfam00780
    Location:1247 → 1509
    CNH; CNH domain
    pfam15796
    Location:529 → 607
    KELK; KELK-motif containing domain of MRCK Ser/Thr protein kinase
    cd20865
    Location:1028 → 1080
    C1_MRCKbeta; protein kinase C conserved region 1 (C1 domain) found in myotonic dystrophy kinase-related Cdc42-binding kinase beta (MRCK beta) and similar proteins
    cl21453
    Location:3 → 412
    PKc_like; Protein Kinases, catalytic domain

  6. XM_033139244.1 → XP_032995135.1  serine/threonine-protein kinase MRCK beta isoform X6

    Conserved Domains (6) summary
    COG0419
    Location:425 → 935
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    cd01243
    Location:1062 → 1196
    PH_MRCK; MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain
    pfam00780
    Location:1222 → 1484
    CNH; CNH domain
    pfam15796
    Location:529 → 607
    KELK; KELK-motif containing domain of MRCK Ser/Thr protein kinase
    cd20865
    Location:1003 → 1055
    C1_MRCKbeta; protein kinase C conserved region 1 (C1 domain) found in myotonic dystrophy kinase-related Cdc42-binding kinase beta (MRCK beta) and similar proteins
    cl21453
    Location:3 → 412
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
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