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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_009671.5 → NP_033801.4 rabankyrin-5
See identical proteins and their annotated locations for NP_033801.4
Status: VALIDATED
- Source sequence(s)
-
AL663082, AL808023
- Consensus CDS
-
CCDS24989.1
- UniProtKB/Swiss-Prot
- B1ATS3, O54807, Q80TG6, Q80UH8, Q810B6
- UniProtKB/TrEMBL
-
B7ZP20
- Related
- ENSMUSP00000118751.2, ENSMUST00000155998.2
- Conserved Domains (8) summary
-
- smart00225
Location:69 → 156
- BTB; Broad-Complex, Tramtrack and Bric a brac
- smart00875
Location:167 → 235
- BACK; BTB And C-terminal Kelch
- cd00204
Location:866 → 992
- ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
- cd15728
Location:1101 → 1163
- FYVE_ANFY1; FYVE domain found in ankyrin repeat and FYVE domain-containing protein 1 (ANFY1) and similar proteins
- pfam00651
Location:61 → 156
- BTB; BTB/POZ domain
- pfam12796
Location:875 → 969
- Ank_2; Ankyrin repeats (3 copies)
- pfam13857
Location:353 → 408
- Ank_5; Ankyrin repeats (many copies)
- sd00045
Location:726 → 767
- ANK; ANK repeat [structural motif]
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000077.7 Reference GRCm39 C57BL/6J
- Range
-
72580828..72662972
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_030245484.2 → XP_030101344.1 rabankyrin-5 isoform X2
- Conserved Domains (4) summary
-
- PHA02876
Location:22 → 384
- PHA02876; ankyrin repeat protein; Provisional
- PHA03095
Location:247 → 538
- PHA03095; ankyrin-like protein; Provisional
- cd15728
Location:646 → 708
- FYVE_ANFY1; FYVE domain found in ankyrin repeat and FYVE domain-containing protein 1 (ANFY1) and similar proteins
- sd00045
Location:271 → 312
- ANK; ANK repeat [structural motif]
-
XM_036156245.1 → XP_036012138.1 rabankyrin-5 isoform X1
- UniProtKB/TrEMBL
-
B7ZP20
- Conserved Domains (7) summary
-
- PHA03095
Location:544 → 835
- PHA03095; ankyrin-like protein; Provisional
- COG0666
Location:391 → 590
- ANKYR; Ankyrin repeat [Signal transduction mechanisms]
- cd15728
Location:943 → 1005
- FYVE_ANFY1; FYVE domain found in ankyrin repeat and FYVE domain-containing protein 1 (ANFY1) and similar proteins
- sd00045
Location:568 → 609
- ANK; ANK repeat [structural motif]
- cd18501
Location:4 → 92
- BACK_ANKFY1_Rank5; BACK (BTB and C-terminal Kelch) domain found in rabankyrin-5 (Rank-5)
- pfam13637
Location:101 → 151
- Ank_4; Ankyrin repeats (many copies)
- cl39094
Location:149 → 411
- Ank_2; Ankyrin repeats (3 copies)