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dhx57 DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [ Pseudochaenichthys georgianus (South Georgia icefish) ]

Gene ID: 117468461, updated on 19-Mar-2024

Summary

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Gene symbol
dhx57
Gene description
DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
See related
EnsemblRapid:ENSPGEG00000024467
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudochaenichthys georgianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Channichthyidae; Pseudochaenichthys
Orthologs
human zebrafish all
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Genomic context

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See dhx57 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
25
Annotation release Status Assembly Chr Location
100 current fPseGeo1.1 (GCF_902827115.1) 23 NC_047525.1 (20819223..20831325)

Chromosome 23 - NC_047525.1Genomic Context describing neighboring genes Neighboring gene striatin interacting protein 2 Neighboring gene MORN repeat containing 2 Neighboring gene small lysine-rich protein 1 Neighboring gene dynamin-1-like protein Neighboring gene short transmembrane mitochondrial protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047525.1 Chromosome 23 Reference fPseGeo1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative ATP-dependent RNA helicase DHX57

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudochaenichthys georgianus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPseGeo1.1

Genomic

  1. NC_047525.1 Reference fPseGeo1.1

    Range
    20819223..20831325
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034112587.1 → XP_033968478.1  putative ATP-dependent RNA helicase DHX57

    Related
    ENSPGEP00000057518.1, ENSPGET00000059598.1
    Conserved Domains (4) summary
    COG1643
    Location:594 → 1458
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
    pfam18044
    Location:368 → 388
    zf-CCCH_4; CCCH-type zinc finger
    cl02687
    Location:311 → 483
    RWD; RWD domain
    cl21463
    Location:245 → 282
    UBA_like_SF; UBA domain-like superfamily
Nucleotide Protein
Heading Accession and Version

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