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LOC117934514 uncharacterized LOC117934514 [ Vitis riparia (riverbank grape) ]

Gene ID: 117934514, updated on 22-Oct-2023

Summary

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Gene symbol
LOC117934514
Gene description
uncharacterized LOC117934514
Gene type
protein coding
RefSeq status
MODEL
Organism
Vitis riparia
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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Genomic context

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See LOC117934514 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
8
Annotation release Status Assembly Chr Location
100 current EGFV_Vit.rip_1.0 (GCF_004353265.1) 17 NC_048447.1 (12843402..12851091)

Chromosome 17 - NC_048447.1Genomic Context describing neighboring genes Neighboring gene protein RKD1-like Neighboring gene protein EMBRYO DEFECTIVE 514 Neighboring gene probable arabinosyltransferase ARAD1 Neighboring gene gibberellin-regulated protein 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_048447.1 Chromosome 17 Reference EGFV_Vit.rip_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC117934514

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vitis riparia Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EGFV_Vit.rip_1.0 Primary Assembly

Genomic

  1. NC_048447.1 Reference EGFV_Vit.rip_1.0 Primary Assembly

    Range
    12843402..12851091
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034856231.1 → XP_034712122.1  uncharacterized protein LOC117934514

    Conserved Domains (2) summary
    smart00744
    Location:72 → 118
    RINGv; The RING-variant domain is a C4HC3 zinc-finger like motif found in a number of cellular and viral proteins
    pfam12428
    Location:123 → 241
    DUF3675; Protein of unknown function (DUF3675)
Nucleotide Protein
Heading Accession and Version

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