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ZNF593OS ZNF593 opposite strand [ Homo sapiens (human) ]

Gene ID: 118568799, updated on 2-Nov-2024

Summary

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Official Symbol
ZNF593OSprovided by HGNC
Official Full Name
ZNF593 opposite strandprovided by HGNC
Primary source
HGNC:HGNC:41278
See related
Ensembl:ENSG00000236782 AllianceGenome:HGNC:41278
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ZNF593-AS
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
all
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Genomic context

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See ZNF593OS in Genome Data Viewer
Location:
1p36.11
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (26169521..26171832, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (26006952..26009263, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (26496012..26498323, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 110 member D Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:26490758-26491327 Neighboring gene chromosome 1 open reading frame 230 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:26494780-26494935 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 481 Neighboring gene zinc finger protein 593 Neighboring gene connector enhancer of kinase suppressor of Ras 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:26508561-26509062 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:26516979-26517796 Neighboring gene cation channel sperm associated 4 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:26524463-26524962 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:26527946-26528918

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. LncRNA ZNF593-AS Alleviates Contractile Dysfunction in Dilated Cardiomyopathy. Fan J, et al. Circ Res, 2021 May 28. PMID 33550812

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See Variation Viewer (GRCh37.p13)

General gene information

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Homology

Gene Ontology Provided by GOA

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative transmembrane protein ZNF593OS
Names
ZNF593 opposite strand protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001395468.1 → NP_001382397.1  putative transmembrane protein ZNF593OS

    Status: VALIDATED

    Source sequence(s)
    AL391650
    Consensus CDS
    CCDS90890.1
    UniProtKB/Swiss-Prot
    A0A0U1RRA0
    Related
    ENSP00000489416.1, ENST00000433939.7

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    26169521..26171832 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    26006952..26009263 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A0A0U1RRA0.1 GenPept UniProtKB/Swiss-Prot:A0A0U1RRA0

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.