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LOC118764020 zinc finger protein 879-like [ Octopus sinensis (East Asian common octopus) ]

Gene ID: 118764020, updated on 28-Dec-2023

Summary

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Gene symbol
LOC118764020
Gene description
zinc finger protein 879-like
See related
EnsemblRapid:LOC118764020
Gene type
protein coding
RefSeq status
MODEL
Organism
Octopus sinensis
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Cephalopoda; Coleoidea; Octopodiformes; Octopoda; Incirrata; Octopodidae; Octopus
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Genomic context

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See LOC118764020 in Genome Data Viewer
Location:
chromosome: LG6
Exon count:
2
Annotation release Status Assembly LG Location
101 current ASM634580v1 (GCF_006345805.1) LG6 NC_043002.1 (109311770..109315947)

Linkage Group LG6 - NC_043002.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 845-like Neighboring gene zinc finger protein 665-like Neighboring gene zinc finger protein 879-like Neighboring gene zinc finger protein 728-like Neighboring gene zinc finger protein 98-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_043002.1 Chromosome LG6 Reference ASM634580v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cytokine production IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of immune system process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 879-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Octopus sinensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM634580v1 Primary Assembly

Genomic

  1. NC_043002.1 Reference ASM634580v1 Primary Assembly

    Range
    109311770..109315947
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036504230.1 → XP_036360123.1  zinc finger protein 879-like

    Related
    XP_036360123.1, XM_036504230.1
    Conserved Domains (3) summary
    COG5048
    Location:35 → 196
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:227 → 306
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:39 → 59
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
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Gene LinkOut

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