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VP_RS05285 UvrD-helicase domain-containing protein [ Vibrio parahaemolyticus RIMD 2210633 ]

Gene ID: 1188588, updated on 6-Oct-2023

Summary

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Gene symbol
VP_RS05285
Gene description
UvrD-helicase domain-containing protein
Locus tag
VP_RS05285
Gene type
protein coding
Organism
Vibrio parahaemolyticus RIMD 2210633 (strain: RIMD 2210633, substrain: RIMD 2210633)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
Old locus tag
VP1083
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Genomic context

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Location:
chromosome: 1
Sequence:
Chromosome: 1; NC_004603.1 (1135576..1138995)

Chromosome 1 - NC_004603.1Genomic Context describing neighboring genes Neighboring gene DUF2075 domain-containing protein Neighboring gene sigma-70 family RNA polymerase sigma factor Neighboring gene hypothetical protein Neighboring gene multiubiquitin domain-containing protein Neighboring gene ThiF family adenylyltransferase Neighboring gene DUF6527 family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004603.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Major domain swiveling revealed by the crystal structures of complexes of E. coli Rep helicase bound to single-stranded DNA and ADP. Korolev S, et al. Cell, 1997 Aug 22. PMID 9288744
  2. A filamentous phage associated with recent pandemic Vibrio parahaemolyticus O3:K6 strains. Nasu H, et al. J Clin Microbiol, 2000 Jun. PMID 10834969, Free PMC Article
  3. Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism distinct from that of V cholerae. Makino K, et al. Lancet, 2003 Mar 1. PMID 12620739

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
UvrD-helicase domain-containing protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004603.1 Reference assembly

    Range
    1135576..1138995
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_005459833.1 UvrD-helicase domain-containing protein [Vibrio parahaemolyticus]

    See identical proteins and their annotated locations for WP_005459833.1

    UniProtKB/TrEMBL
    Q87QR6
    Conserved Domains (3) summary
    COG0210
    Location:197 → 866
    UvrD; Superfamily I DNA or RNA helicase [Replication, recombination and repair]
    pfam06114
    Location:36 → 171
    Peptidase_M78; IrrE N-terminal-like domain
    cl00641
    Location:904 → 1120
    Cas4_I-A_I-B_I-C_I-D_II-B; CRISPR/Cas system-associated protein Cas4
Nucleotide Protein
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