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gsdf gonadal somatic cell derived factor [ Acanthopagrus latus (yellowfin seabream) ]

Gene ID: 119030000, updated on 21-Mar-2024

Summary

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Gene symbol
gsdf
Gene description
gonadal somatic cell derived factor
See related
EnsemblRapid:ENSALTG00010024441
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthopagrus latus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Spariformes; Sparidae; Acanthopagrus
Orthologs
zebrafish all
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Genomic context

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See gsdf in Genome Data Viewer
Location:
chromosome: 12
Exon count:
5
Annotation release Status Assembly Chr Location
100 current fAcaLat1.1 (GCF_904848185.1) 12 NC_051050.1 (19520639..19525112)

Chromosome 12 - NC_051050.1Genomic Context describing neighboring genes Neighboring gene lysosome membrane protein 2-like Neighboring gene nucleoporin 54 Neighboring gene serine/threonine-protein phosphatase with EF-hands 2-like Neighboring gene AF4/FMR2 family, member 1 Neighboring gene macrophage mannose receptor 1 Neighboring gene uncharacterized LOC119029998

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051050.1 Chromosome 12 Reference fAcaLat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cloning and expression pattern of gsdf during the first maleness reproductive phase in the protandrous Acanthopagrus latus. Chen Y, et al. Gen Comp Endocrinol, 2015 Jun-Jul. PMID 25736452

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables growth factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in BMP signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in SMAD protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gonadal somatic cell derived factor
Names
gonadal soma-derived factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthopagrus latus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAcaLat1.1 Primary Assembly

Genomic

  1. NC_051050.1 Reference fAcaLat1.1 Primary Assembly

    Range
    19520639..19525112
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037117283.1 → XP_036973178.1  gonadal somatic cell derived factor

    UniProtKB/TrEMBL
    A0A0E3EKU5
    Related
    ENSALTP00010066065.1, ENSALTT00010072058.1
    Conserved Domains (1) summary
    cd19379
    Location:109 → 201
    TGF_beta_GSDF; transforming growth factor beta (TGF-beta) like domain found in Danio rerio gonadal somatic cell derived factor (GSDF) and similar proteins
Nucleotide Protein
Heading Accession and Version

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