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LOC119034487 WAS/WASL-interacting protein family member 1-like [ Acanthopagrus latus (yellowfin seabream) ]

Gene ID: 119034487, updated on 14-Dec-2023

Summary

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Gene symbol
LOC119034487
Gene description
WAS/WASL-interacting protein family member 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthopagrus latus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Spariformes; Sparidae; Acanthopagrus
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Genomic context

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See LOC119034487 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
22
Annotation release Status Assembly Chr Location
100 current fAcaLat1.1 (GCF_904848185.1) 16 NC_051054.1 (25554460..25574133)

Chromosome 16 - NC_051054.1Genomic Context describing neighboring genes Neighboring gene gephyrin a Neighboring gene protein associated with LIN7 1, MAGUK p55 family member a Neighboring gene uncharacterized LOC119004287 Neighboring gene uncharacterized LOC119034486 Neighboring gene uncharacterized LOC119034489 Neighboring gene uncharacterized LOC119005200

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051054.1 Chromosome 16 Reference fAcaLat1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA-DNA hybrid ribonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WAS/WASL-interacting protein family member 1-like; proline-rich receptor-like protein kinase PERK8; uncharacterized protein LOC119034487

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthopagrus latus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAcaLat1.1 Primary Assembly

Genomic

  1. NC_051054.1 Reference fAcaLat1.1 Primary Assembly

    Range
    25554460..25574133
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037125534.1 → XP_036981429.1  uncharacterized protein LOC119034487 isoform X1

    Conserved Domains (1) summary
    pfam13472
    Location:14 → 132
    Lipase_GDSL_2; GDSL-like Lipase/Acylhydrolase family

  2. XM_037125544.1 → XP_036981439.1  uncharacterized protein LOC119034487 isoform X4

    Conserved Domains (1) summary
    pfam13472
    Location:14 → 132
    Lipase_GDSL_2; GDSL-like Lipase/Acylhydrolase family

  3. XM_037125545.1 → XP_036981440.1  uncharacterized protein LOC119034487 isoform X5

    Conserved Domains (1) summary
    pfam13472
    Location:14 → 132
    Lipase_GDSL_2; GDSL-like Lipase/Acylhydrolase family

  4. XM_037125540.1 → XP_036981435.1  uncharacterized protein LOC119034487 isoform X1

    Conserved Domains (1) summary
    pfam13472
    Location:14 → 132
    Lipase_GDSL_2; GDSL-like Lipase/Acylhydrolase family

  5. XM_037125531.1 → XP_036981426.1  uncharacterized protein LOC119034487 isoform X1

    Conserved Domains (1) summary
    pfam13472
    Location:14 → 132
    Lipase_GDSL_2; GDSL-like Lipase/Acylhydrolase family

  6. XM_037125535.1 → XP_036981430.1  uncharacterized protein LOC119034487 isoform X1

    Conserved Domains (1) summary
    pfam13472
    Location:14 → 132
    Lipase_GDSL_2; GDSL-like Lipase/Acylhydrolase family

  7. XM_037125536.1 → XP_036981431.1  uncharacterized protein LOC119034487 isoform X1

    Conserved Domains (1) summary
    pfam13472
    Location:14 → 132
    Lipase_GDSL_2; GDSL-like Lipase/Acylhydrolase family

  8. XM_037125537.1 → XP_036981432.1  uncharacterized protein LOC119034487 isoform X1

    Conserved Domains (1) summary
    pfam13472
    Location:14 → 132
    Lipase_GDSL_2; GDSL-like Lipase/Acylhydrolase family

  9. XM_037125547.1 → XP_036981442.1  proline-rich receptor-like protein kinase PERK8 isoform X7

    Conserved Domains (1) summary
    pfam13472
    Location:14 → 132
    Lipase_GDSL_2; GDSL-like Lipase/Acylhydrolase family

  10. XM_037125533.1 → XP_036981428.1  uncharacterized protein LOC119034487 isoform X1

    Conserved Domains (1) summary
    pfam13472
    Location:14 → 132
    Lipase_GDSL_2; GDSL-like Lipase/Acylhydrolase family

  11. XM_037125541.1 → XP_036981436.1  uncharacterized protein LOC119034487 isoform X1

    Conserved Domains (1) summary
    pfam13472
    Location:14 → 132
    Lipase_GDSL_2; GDSL-like Lipase/Acylhydrolase family

  12. XM_037125539.1 → XP_036981434.1  uncharacterized protein LOC119034487 isoform X1

    Conserved Domains (1) summary
    pfam13472
    Location:14 → 132
    Lipase_GDSL_2; GDSL-like Lipase/Acylhydrolase family

  13. XM_037125542.1 → XP_036981437.1  uncharacterized protein LOC119034487 isoform X2

    Conserved Domains (1) summary
    pfam13472
    Location:14 → 132
    Lipase_GDSL_2; GDSL-like Lipase/Acylhydrolase family

  14. XM_037125546.1 → XP_036981441.1  WAS/WASL-interacting protein family member 1-like isoform X6

    Conserved Domains (1) summary
    pfam13472
    Location:14 → 132
    Lipase_GDSL_2; GDSL-like Lipase/Acylhydrolase family

  15. XM_037125532.1 → XP_036981427.1  uncharacterized protein LOC119034487 isoform X1

    Conserved Domains (1) summary
    pfam13472
    Location:14 → 132
    Lipase_GDSL_2; GDSL-like Lipase/Acylhydrolase family

  16. XM_037125548.1 → XP_036981443.1  uncharacterized protein LOC119034487 isoform X8

  17. XM_037125549.1 → XP_036981444.1  uncharacterized protein LOC119034487 isoform X8

  18. XM_037125543.1 → XP_036981438.1  uncharacterized protein LOC119034487 isoform X3

    Conserved Domains (2) summary
    cl02808
    Location:158 → 221
    RT_like; Reverse transcriptase (RT, RNA-dependent DNA polymerase)_like family. An RT gene is usually indicative of a mobile element such as a retrotransposon or retrovirus. RTs occur in a variety of mobile elements, including retrotransposons, retroviruses, group ...
    cl14782
    Location:230 → 360
    RNase_H_like; Ribonuclease H-like superfamily, including RNase H, HI, HII, HIII, and RNase-like domain IV of spliceosomal protein Prp8
Nucleotide Protein
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