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LOC119193850 proteasome subunit alpha type-1-like [ Manduca sexta (tobacco hornworm) ]

Gene ID: 119193850, updated on 14-Dec-2023

Summary

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Gene symbol
LOC119193850
Gene description
proteasome subunit alpha type-1-like
See related
EnsemblRapid:ENSMSXG00000007412
Gene type
protein coding
RefSeq status
MODEL
Organism
Manduca sexta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Sphingidae; Sphinginae; Sphingini; Manduca
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC119193850 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
3
Annotation release Status Assembly Chr Location
102 current JHU_Msex_v1.0 (GCF_014839805.1) 7 NC_051121.1 (12691400..12693026, complement)

Chromosome 7 - NC_051121.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119193830 Neighboring gene uncharacterized LOC119188604 Neighboring gene FMRFamide-related peptides Neighboring gene proteasome subunit alpha type-1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051121.1 Chromosome 7 Reference JHU_Msex_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome core complex, alpha-subunit complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proteasome subunit alpha type-1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manduca sexta Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference JHU_Msex_v1.0 Primary Assembly

Genomic

  1. NC_051121.1 Reference JHU_Msex_v1.0 Primary Assembly

    Range
    12691400..12693026 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037447683.1 → XP_037303580.1  proteasome subunit alpha type-1-like

    Related
    ENSMSXP00000010570.1, ENSMSXT00000012223.1
    Conserved Domains (1) summary
    cd03749
    Location:6 → 170
    proteasome_alpha_type_1; The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming ...
Nucleotide Protein
Heading Accession and Version

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