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HEMK1 HemK methyltransferase family member 1 [ Motacilla alba alba ]

Gene ID: 119706273, updated on 3-Aug-2024

Summary

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Gene symbol
HEMK1
Gene description
HemK methyltransferase family member 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Motacilla alba alba (sub-species: alba)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Motacillidae; Motacilla
Orthologs
human mouse all
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Genomic context

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See HEMK1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
13
Annotation release Status Assembly Chr Location
100 current Motacilla_alba_V1.0_pri (GCF_015832195.1) 12 NC_052027.1 (16342757..16428547)

Chromosome 12 - NC_052027.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119706278 Neighboring gene chromosome 12 C3orf18 homolog Neighboring gene MAPK activated protein kinase 3 Neighboring gene cytokine inducible SH2 containing protein Neighboring gene dedicator of cytokinesis 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052027.1 Chromosome 12 Reference Motacilla_alba_V1.0_pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
MTRF1L release factor glutamine methyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Motacilla alba alba Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Motacilla_alba_V1.0_pri Primary Assembly

Genomic

  1. NC_052027.1 Reference Motacilla_alba_V1.0_pri Primary Assembly

    Range
    16342757..16428547
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038149694.1 → XP_038005622.1  MTRF1L release factor glutamine methyltransferase isoform X3

    Conserved Domains (1) summary
    cl17173
    Location:1 → 157
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  2. XM_038149692.1 → XP_038005620.1  MTRF1L release factor glutamine methyltransferase isoform X1

    Conserved Domains (1) summary
    PRK09328
    Location:70 → 275
    PRK09328; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional

  3. XM_038149693.1 → XP_038005621.1  MTRF1L release factor glutamine methyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A7K5BYT4
    Conserved Domains (1) summary
    PRK09328
    Location:70 → 351
    PRK09328; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional

RNA

  1. XR_005258492.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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