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LOC119876313 adenosine deaminase domain-containing protein 2-like [ Canis lupus familiaris (dog) ]

Gene ID: 119876313, updated on 23-Nov-2023

Summary

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Gene symbol
LOC119876313
Gene description
adenosine deaminase domain-containing protein 2-like
See related
Ensembl:ENSCAFG00845004773
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
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Genomic context

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See LOC119876313 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
10
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 5 NC_051809.1 (68460859..68467673, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 5 NC_049226.1 (68660944..68667760, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 5 NC_049746.1 (68245729..68252294, complement)

Chromosome 5 - NC_051809.1Genomic Context describing neighboring genes Neighboring gene TATA box-binding protein-associated factor RNA polymerase I subunit C-like Neighboring gene uncharacterized LOC119881486 Neighboring gene TATA-box binding protein associated factor, RNA polymerase I subunit C Neighboring gene potassium voltage-gated channel subfamily G member 4-like Neighboring gene dynein axonemal assembly factor 1 Neighboring gene hydroxysteroid dehydrogenase like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables double-stranded RNA adenosine deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA-specific adenosine deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in adenosine to inosine editing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: adenosine deaminase domain-containing protein 2-like; adenosine deaminase domain-containing protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051809.1 Reference ROS_Cfam_1.0

    Range
    68460859..68467673 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038666894.1 → XP_038522822.1  LOW QUALITY PROTEIN: adenosine deaminase domain-containing protein 2-like isoform X1

    UniProtKB/TrEMBL
    A0A8C0M0W2, A0A8C0SS68
    Related
    ENSCAFP00845006774.1, ENSCAFT00845008587.1
    Conserved Domains (2) summary
    cl00054
    Location:130 → 190
    DSRM_SF; double-stranded RNA binding motif (DSRM) superfamily
    cl02661
    Location:299 → 614
    A_deamin; Adenosine-deaminase (editase) domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049746.1 Alternate UNSW_CanFamBas_1.0

    Range
    68245729..68252294 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038602275.1 → XP_038458203.1  LOW QUALITY PROTEIN: adenosine deaminase domain-containing protein 2-like isoform X2

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049226.1 Alternate UU_Cfam_GSD_1.0

    Range
    68660944..68667760 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038538148.1 → XP_038394076.1  adenosine deaminase domain-containing protein 2-like isoform X4

    UniProtKB/TrEMBL
    A0A8C0SS68

  2. XM_038538149.1 → XP_038394077.1  adenosine deaminase domain-containing protein 2-like isoform X1

    UniProtKB/TrEMBL
    A0A8C0M0W2, A0A8C0SS68
    Conserved Domains (2) summary
    cl00054
    Location:130 → 190
    DSRM_SF; double-stranded RNA binding motif (DSRM) superfamily
    cl02661
    Location:299 → 614
    A_deamin; Adenosine-deaminase (editase) domain

  3. XM_038538147.1 → XP_038394075.1  adenosine deaminase domain-containing protein 2-like isoform X3

    UniProtKB/TrEMBL
    A0A8C0SS68
Nucleotide Protein
Heading Accession and Version