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LOC120066681 myosin-10-like [ Salvelinus namaycush (lake trout) ]

Gene ID: 120066681, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120066681
Gene description
myosin-10-like
See related
EnsemblRapid:ENSSNMG00000046986
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus namaycush
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
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Genomic context

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See LOC120066681 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
41
Annotation release Status Assembly Chr Location
100 current SaNama_1.0 (GCF_016432855.1) 2 NC_052308.1 (67482846..67565291)

Chromosome 2 - NC_052308.1Genomic Context describing neighboring genes Neighboring gene phosphoinositide 3-kinase regulatory subunit 6-like Neighboring gene bMERB domain-containing protein 1-like Neighboring gene E3 ubiquitin/ISG15 ligase TRIM25-like Neighboring gene ubinuclein-2-like Neighboring gene intraflagellar transport protein 56-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052308.1 Chromosome 2 Reference SaNama_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytoskeletal motor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of myosin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myosin-10-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvelinus namaycush Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SaNama_1.0 Primary Assembly

Genomic

  1. NC_052308.1 Reference SaNama_1.0 Primary Assembly

    Range
    67482846..67565291
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039018126.1 → XP_038874054.1  myosin-10-like isoform X1

    UniProtKB/TrEMBL
    A0A8U1FDX4
    Related
    ENSSNMP00000069383.1, ENSSNMT00000075327.1
    Conserved Domains (3) summary
    pfam01576
    Location:864 → 1944
    Myosin_tail_1; Myosin tail
    pfam02736
    Location:33 → 68
    Myosin_N; Myosin N-terminal SH3-like domain
    cl22853
    Location:99 → 787
    Motor_domain; Myosin and Kinesin motor domain

  2. XM_039018134.1 → XP_038874062.1  myosin-10-like isoform X2

    UniProtKB/TrEMBL
    A0A8U1FCE2
    Related
    ENSSNMP00000069373.1, ENSSNMT00000075312.1
    Conserved Domains (3) summary
    cd14920
    Location:99 → 771
    MYSc_Myh10; class II myosin heavy chain 10, motor domain
    pfam01576
    Location:848 → 1928
    Myosin_tail_1; Myosin tail
    pfam02736
    Location:33 → 68
    Myosin_N; Myosin N-terminal SH3-like domain
Nucleotide Protein
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