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LOC120409601 interferon-induced GTP-binding protein Mx1-like [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120409601, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120409601
Gene description
interferon-induced GTP-binding protein Mx1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
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Genomic context

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See LOC120409601 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
16
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 1 NC_052623.1 (161762862..161792187, complement)

Linkage Group 1 - NC_052623.1Genomic Context describing neighboring genes Neighboring gene interferon-induced GTP-binding protein Mx1-like Neighboring gene uncharacterized LOC120395667 Neighboring gene interferon-induced GTP-binding protein Mx2-like Neighboring gene FAM3 metabolism regulating signaling molecule B Neighboring gene uncharacterized LOC120376166 Neighboring gene beta-secretase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_052623.1 Chromosome 1 Reference ASM1616193v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in defense response to virus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
interferon-induced GTP-binding protein Mx1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052623.1 Reference ASM1616193v1 Primary Assembly

    Range
    161762862..161792187 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039548111.1 → XP_039404045.1  interferon-induced GTP-binding protein Mx1-like

    Conserved Domains (3) summary
    cd08771
    Location:58 → 328
    DLP_1; Dynamin_like protein family includes dynamins and Mx proteins
    pfam01031
    Location:248 → 536
    Dynamin_M; Dynamin central region
    pfam02212
    Location:559 → 647
    GED; Dynamin GTPase effector domain

  2. XM_039548100.1 → XP_039404034.1  interferon-induced GTP-binding protein Mx1-like

    Conserved Domains (3) summary
    cd08771
    Location:58 → 328
    DLP_1; Dynamin_like protein family includes dynamins and Mx proteins
    pfam01031
    Location:248 → 536
    Dynamin_M; Dynamin central region
    pfam02212
    Location:559 → 647
    GED; Dynamin GTPase effector domain

  3. XM_039548089.1 → XP_039404023.1  interferon-induced GTP-binding protein Mx1-like

    Conserved Domains (3) summary
    cd08771
    Location:58 → 328
    DLP_1; Dynamin_like protein family includes dynamins and Mx proteins
    pfam01031
    Location:248 → 536
    Dynamin_M; Dynamin central region
    pfam02212
    Location:559 → 647
    GED; Dynamin GTPase effector domain
Nucleotide Protein
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