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LOC120543511 histone H1-like [ Polypterus senegalus (gray bichir) ]

Gene ID: 120543511, updated on 7-Dec-2023

Summary

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Gene symbol
LOC120543511
Gene description
histone H1-like
Locus tag
GTO96_0008927
Gene type
protein coding
RefSeq status
MODEL
Organism
Polypterus senegalus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Polypteriformes; Polypteridae; Polypterus
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Genomic context

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See LOC120543511 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
1
Annotation release Status Assembly Chr Location
100 current ASM1683550v1 (GCF_016835505.1) 14 NC_053167.1 (138189259..138190055)

Chromosome 14 - NC_053167.1Genomic Context describing neighboring genes Neighboring gene histone H2B 5-like Neighboring gene histone H2A-like Neighboring gene histone H3 Neighboring gene histone H1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053167.1 Chromosome 14 Reference ASM1683550v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone H1-like
Names
H15 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Polypterus senegalus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1683550v1 Primary Assembly

Genomic

  1. NC_053167.1 Reference ASM1683550v1 Primary Assembly

    Range
    138189259..138190055
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039776610.1 → XP_039632544.1  histone H1-like

    UniProtKB/TrEMBL
    A0A8X8BP81
    Conserved Domains (1) summary
    cd00073
    Location:26 → 110
    H15; linker histone 1 and histone 5 domains; the basic subunit of chromatin is the nucleosome, consisting of an octamer of core histones, two full turns of DNA, a linker histone (H1 or H5) and a variable length of linker DNA; H1/H5 are chromatin-associated ...
Nucleotide Protein
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